Gene Sfum_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1749 
Symbol 
ID4459931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2141419 
End bp2141967 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID639702518 
ProductBioY protein 
Protein accessionYP_845871 
Protein GI116749184 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.969315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0325978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAA GGGACCTGCA GAGGACCGTA TACGCCTCAC TCCTGGCCGC CCTGGTTGCC 
GTCTCCGCCT ACCTCCCGAT TCCCATCGGA CCGGTGCCCA TCATTTTGCA GAACATATTC
ATTCTGCTCG CCGGATTGCT GCTCGGCAGC CGTTGGGGAC TCATCAGCAT GTGCATCTAC
CTGCTGGTCG GCGCCATCGG AATACCCGTC TTCACCGGAG GAAAGGGGGG CCTGGCGCAC
TTCATGGGAC CGACGGGCGG CTACCTGGTG GGCTACGCCT GTTGCGCCTA CGTCACGGGG
TTCATCGCCG AGCGGGGCAG GTCGAGCCTT GGGCGGGACA TCCTGGCGGT CACGGCGGGC
GATCTGATGC TCTTCGTCTT CGGGGTCCCA TGGCTCATGG TGGTGACCGG AATGACCCTG
GAAAAAGCGC TGCTCGCGGG CATGCTCCCG TTTCTGCCGG GAGACGCGGT CAAGGCCGCC
GCGGCGGTGG TACTGGCAAA GGCGCTGCGC CCGGTGGTGA ATAGGCAGAT GGAAACGGTT
GCATCATGA
 
Protein sequence
MLARDLQRTV YASLLAALVA VSAYLPIPIG PVPIILQNIF ILLAGLLLGS RWGLISMCIY 
LLVGAIGIPV FTGGKGGLAH FMGPTGGYLV GYACCAYVTG FIAERGRSSL GRDILAVTAG
DLMLFVFGVP WLMVVTGMTL EKALLAGMLP FLPGDAVKAA AAVVLAKALR PVVNRQMETV
AS