Gene Sfum_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1723 
Symbol 
ID4459975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2106624 
End bp2108957 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content64% 
IMG OID639702492 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_845845 
Protein GI116749158 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0070] Glutamate synthase domain 3
[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC AGCCATACAT TCGGATACCC GGTGTGGAGA ACGGCCACCG CCTGGAATCG 
CGCATCCTGG AGGAACGGAT TCAGAAGGCG GTCGAAAGCG GCTGCCGGTA TCTGGAAATC
GAAGCCTACG GCCAGCACGG CCTGGGGGGA CGCTTGTGGA GGGCCGGTGA AGATCCCGTC
TATGTCAAGA TCACCGGTTC CGTCGGTCAA CGTGTGGGTT CCATGGGGTT TCCGAACACG
CGCATCGAAG TCTTCGGGCC GGGATCGGAC GATGTCGGCT GGTTGAACGG GGGCGCCGAG
ATCACCATTC ACGGCAATGC GGCCAACGGG ATCGGCAACG CCATGGCGCA GGGCAAGATT
TACGTGGCGG GCAACACGGG CGCCCGCGGG ATGACAATGA CCAAGCGCAA CCCGCGCTTT
GAGCCTCCGG AGCTGTGGGT GCTCGGTTCC GTGGGCGATT ACTTTGCGGA ATTCATGGCC
GGAGGCATTG CGGTGGTCTG CGGATACGAG CCGCAGAATC CCGAAAACGT GCTCGGCTAT
CGGCCTTGCG TCGGCATGGT GGGCGGCAGG ATTTACTTCC GCGGGCCTCA CAAGGGGTAC
AGTCGCGCCG ATGCCCGGCT CATGCCTCTT TCCGATGAAG ACTGGTCCTG GTTGTCCGGG
AACCTCAAAA CCTATTTGCG GGCCATCAAT CGTCTCGAAC TGCTCGATCA ACTGGAGGAC
CGGGAGCAGT GGCAATCGCT GATCGCTCGG GGGCCGCAGG AAAAGTACGC CAAACCGGCC
CGTTCCATGG CCGCCTTCCG CCGTGAAATC TGGGACGAGG AACTCGGCAG GGGCGGTCTG
ATCGGGGATC TCACGGACCT GGACCGCGGT CCGATTTCCA TCATCACCAC GGGACACTTG
CGCCGGTACG TGCCCGTCTG GGAAAACCGG AAGTACGCCG CCCCCTGTGA GGCGAGCTGT
CCCACGGGGA TGCCCGTGCA CGAGCGGTGG CGCCTCATCC GGGCCGGCCG AATCGACGAG
GCCGTCGATC TCGCGCTGTC CTATACGCCT TTCCCGGCTT CGGTCTGCGG GTACCTGTGT
CCGAACCTGT GCATGCAGGG CTGCACGCGC GGGACGATCA ACATGGCTCC CGTCGACGTC
AGCCAACTGG GCAAGGCGAG CATAAAGGCC AGGCTGCCCG AGCTGCCCCC GCTTTCCGGG
AAACGCGTGG CGGTCATCGG CGGCGGACCG GCGGGTATCT CGGTCGCCTG GCAACTGCGC
CGCAAGGGCC ATGAGACCGT GATCTACGAT ACGCGAGGCG CCCTCGGCGG CAAGATCTCC
GCGCTCATCC CCTCCTCCCG CATTCCGGGA GACGTCATCG ACGCAGAGGT GGAACGCATC
CGGGAAGCCA TTCCTCATGT GCATCTGCAG CAGAAGCTCG ATCGCGGCGA TGTCGAACAG
CTCAAGGCCG ACAACGACTT CGTGGTGGTT GCCGTGGGCG CGAACAAGCC CCGGGTGATC
CCCATTCCGG GCAAGGAGCG GATGATCCCG GCGCTCGATT TCCTGCTGCA AAGCAAGAGC
GGCCGGATCC AGGTCGGTCG CCGCGTCGTG ATCGTCGGCG CCGGCAACGT CGGCTGCGAT
GCGGCAACCG AGGCGTTTCG CCTGGGCGCC GAAGAAGTCA CCCTGGTGGA TATCCAGGAG
CCGCTTTCCT TCGGGAAGGA GCGCAAGGCG GCCGAAGAGG CCGGCGCCAG TTTCCGCTGG
CCGTGCTTCA GCAAGGCCGT GACTGAAGAA GGCCTCGAGC TGACCTCCGG GGAGGTTATC
CCCGCCGACA CCGTGATCAT TTCCGTCGGC GACATGCCCG ACCTTGATTT TCTGCCGGAG
ACCGTAGCCG TGGAACGGGG CTTCGTGAAG GTGGACGAAT CCTACCAGAC GACGGATCCG
CAGGTCTTCG CCATCGGCGA TGCCGTGAAG CTGGGACTCC TGACCGATGC CATCGGGGCC
GGCCGCAAGG CGGCCCAGGC CATCTCCGAT ATCCTCGAAG GAAAAAGACC GCGCGGCGAC
GCTCGGAAGA TGATCGACTA CAACCGCATC AGGCTGGAAT ACTTCGACCC GCGCATGCTC
AAATTCGACG GCATCGAGCA GTGCGCGTCC CAATGCTCCT CCTGCGGTGC GTGCCGCGAC
TGCGGCATCT GTGTCACCAT GTGCCCTCAG ACCGCCATTT CCAGACAGGA AAAGGACAAT
CCCTTCGGCT TCGAAATGGT GGTCGACCCC GACCGCTGCA TCGGCTGCGG ATTCTGCGCC
GGTTCGTGTC CGTGCGGCAT TTGGGACCTG GTGGAAAACG ATCCGCTGGA ATAG
 
Protein sequence
MSNQPYIRIP GVENGHRLES RILEERIQKA VESGCRYLEI EAYGQHGLGG RLWRAGEDPV 
YVKITGSVGQ RVGSMGFPNT RIEVFGPGSD DVGWLNGGAE ITIHGNAANG IGNAMAQGKI
YVAGNTGARG MTMTKRNPRF EPPELWVLGS VGDYFAEFMA GGIAVVCGYE PQNPENVLGY
RPCVGMVGGR IYFRGPHKGY SRADARLMPL SDEDWSWLSG NLKTYLRAIN RLELLDQLED
REQWQSLIAR GPQEKYAKPA RSMAAFRREI WDEELGRGGL IGDLTDLDRG PISIITTGHL
RRYVPVWENR KYAAPCEASC PTGMPVHERW RLIRAGRIDE AVDLALSYTP FPASVCGYLC
PNLCMQGCTR GTINMAPVDV SQLGKASIKA RLPELPPLSG KRVAVIGGGP AGISVAWQLR
RKGHETVIYD TRGALGGKIS ALIPSSRIPG DVIDAEVERI REAIPHVHLQ QKLDRGDVEQ
LKADNDFVVV AVGANKPRVI PIPGKERMIP ALDFLLQSKS GRIQVGRRVV IVGAGNVGCD
AATEAFRLGA EEVTLVDIQE PLSFGKERKA AEEAGASFRW PCFSKAVTEE GLELTSGEVI
PADTVIISVG DMPDLDFLPE TVAVERGFVK VDESYQTTDP QVFAIGDAVK LGLLTDAIGA
GRKAAQAISD ILEGKRPRGD ARKMIDYNRI RLEYFDPRML KFDGIEQCAS QCSSCGACRD
CGICVTMCPQ TAISRQEKDN PFGFEMVVDP DRCIGCGFCA GSCPCGIWDL VENDPLE