Gene Sfum_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1722 
Symbol 
ID4459974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2105815 
End bp2106255 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content55% 
IMG OID639702491 
Productferric uptake regulator family protein 
Protein accessionYP_845844 
Protein GI116749157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.907916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAC ATCAGGATCG AGTGGACCTG GTCATCAAAA GGCTCAAGCA AAAGGGATGC 
CGGATCACAC CCCAGCGGCT CGCCATAATC CGGATATTGG CGGAAAGCAA TGTGCACCCG
ACCGTCGAGG AGATTTACGA GAGGGTCCGG GTCAATTTCC CCACCACAAG CCTGGCCACC
GTCTACAAGA CCGTGTCGGT GATGAAGGAA CTGGGAGAAG TGCTGGAGCT GGAATTCAGC
AGCGATCAAA ACCGGTATGA CGGACACAAT CCGAGCCCTC ACCCCCACTG CATCTGCGTG
AAATGCCGAA GCATCGTCGA TCCCGAATTG GGCAGTCTCG CCCATATCAC CCGGGAACTG
GCTTCAGGAA CGGGGTACAG GATCTTGAGC CATCGCCTTG ATTTTTACGG AATATGTCCA
AAATGTCAGG GCGAATCCTA G
 
Protein sequence
MGAHQDRVDL VIKRLKQKGC RITPQRLAII RILAESNVHP TVEEIYERVR VNFPTTSLAT 
VYKTVSVMKE LGEVLELEFS SDQNRYDGHN PSPHPHCICV KCRSIVDPEL GSLAHITREL
ASGTGYRILS HRLDFYGICP KCQGES