Gene Sfum_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1708 
Symbol 
ID4459995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2088777 
End bp2089109 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID639702477 
Productthioredoxin 
Protein accessionYP_845830 
Protein GI116749143 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00102285 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.772138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTA AAAATATCAT CGAGGTCACG GACGGCAGCT TCGACCAGGA AGTCCTGCAA 
TCCGATGTGC CGGTGCTGGT GGATTTCTGG GCTCCGTGGT GCGGTCCGTG CCGGGCCATT
GCTCCTGTTA TCGAAGAATT GTCCGGAGAT TACGAGGCCA GGCTGAAGGT GGCCAAGTGC
AACGTTGATG ACAATCCGAA AACGCCCAGC AGGTATGGCA TTCGAGCCAT CCCGACCTTG
ATCATTTTCA AGGGCGGGAA TGTCAGCGAG CAGATCACGG GGGCCGTGGC AAAGTCCCAG
ATCACTGCCG CCATCGACAA GGCCGTCGGC TAA
 
Protein sequence
MAGKNIIEVT DGSFDQEVLQ SDVPVLVDFW APWCGPCRAI APVIEELSGD YEARLKVAKC 
NVDDNPKTPS RYGIRAIPTL IIFKGGNVSE QITGAVAKSQ ITAAIDKAVG