Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1707 |
Symbol | |
ID | 4459994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2087190 |
End bp | 2088551 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702476 |
Product | DNA repair protein RadA |
Protein accession | YP_845829 |
Protein GI | 116749142 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0112208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.59861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGGTC TCAAGACGAT CTATCGATGT CAGCAGTGCG GCTACGTGAG CCCGAAATGG CTGGGCCGTT GTCCCGAGTG CCGGAGTTGG CAGAGTCTGG TGGAGGAGGT CACGCATAAG GCTTCAGGGC GGTTGGAGCC CCATGGGCAA GCGGCTCGTC CCCTGCCCCT GGCGGAAATT CCGATGGAGT CGGAAGCACG GTTCACCACA GGCATCGGTG AGTGGGACCG AGTGCTGGGA GGAGGGCTGG TCAGCGGGTC CCTCATTCTG CTGGCAGGCG ACCCCGGCAT CGGGAAATCC ACGCTCCTGC TCCAGGCGCT TGCCCTCATG TCGCAAAAGA AAAAGGTCCT CTACGTCTCC GGTGAAGAGA GCCCGCAACA ACTGAAACTG CGGGCCGCAC GGCTGAGAAT CGAATCCGGA GGACTGCTCA TCTTTTCCGA AACCTCCCTG GAGGCCGTCC TTGACGTCAT CGACCACTCG CATCCGCAGA TCCTGGCGGT GGATTCCATT CAGACCATGC ACACCATGGG GCTCGAGGTC GCTCCGGGTT CCATAAGCCA GGTCCGGGAA TGTGCGTTGC GGCTGATGCG CGCCGCAAAA GACGGCAACA TCAGTATCTT CCTGGTCGGC CACGTCACCA AGGAAGGCTC CATCGCCGGT CCCCGAGCCC TCGAACACCT TGTGGACACC GTTCTCTACC TTGAAGGGGA TCGCACGCAT ACGTTCCGGC TGTTGCGAGC GGTCAAGAAC CGATATGGAT CAACCAACGA GGTCGGTGTG TTCGAAATGA AGGAGGCGGG ATTGGAGGAA GTGCCGAATC CTTCTCAATT CCTTCTTGCG GAACGGCCCA CGGGTGTATC CGGATCGGTG GTGGTGTGTT CGATGGAGGG CACCCGCCCC TTGCTGGTGG AGCTGCAGGC GCTGGTCGGC GCCACCGGAT GGACCCAGCC CCGGCGGACC AGCATGGGAA TCGATACCAA CCGGGTTTCC CTCCTGCTGG CGGTGCTCGA AAAGAAGCTC GGGTTCAATT TCGGTCAACA GGATGTTTTC GTGAACGTGG CGGGAGGTGT CCGCCTGCAG GAACCGGCCG CCGACCTCGC CCTGACGACG GCGCTGATGA GCTCTTACCT CGACCGGCCG TTGCCCCAGG AACTGGCGGT GTGGGGCGAG GTCGGACTGG CGGGGGAAGT GCGCGGCGTG GGGCATGGCG CGGCCCGGGC CATGGAAGCG GCAAAACTCG GGTTTACGCG CTGTCTCATG CCGGGCAGCA ATGCCGAACG GCTTTCACCG GATGCGGGTG TCGTCTACAT GGGCGCTCGT TCGCTACAGG ACGTTCTGCG GATGCTGTTT GACGGCACAT AG
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Protein sequence | MGGLKTIYRC QQCGYVSPKW LGRCPECRSW QSLVEEVTHK ASGRLEPHGQ AARPLPLAEI PMESEARFTT GIGEWDRVLG GGLVSGSLIL LAGDPGIGKS TLLLQALALM SQKKKVLYVS GEESPQQLKL RAARLRIESG GLLIFSETSL EAVLDVIDHS HPQILAVDSI QTMHTMGLEV APGSISQVRE CALRLMRAAK DGNISIFLVG HVTKEGSIAG PRALEHLVDT VLYLEGDRTH TFRLLRAVKN RYGSTNEVGV FEMKEAGLEE VPNPSQFLLA ERPTGVSGSV VVCSMEGTRP LLVELQALVG ATGWTQPRRT SMGIDTNRVS LLLAVLEKKL GFNFGQQDVF VNVAGGVRLQ EPAADLALTT ALMSSYLDRP LPQELAVWGE VGLAGEVRGV GHGAARAMEA AKLGFTRCLM PGSNAERLSP DAGVVYMGAR SLQDVLRMLF DGT
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