Gene Sfum_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1702 
Symbol 
ID4459989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2081866 
End bp2082747 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content59% 
IMG OID639702471 
Productsuccinyl-CoA synthetase, alpha subunit 
Protein accessionYP_845824 
Protein GI116749137 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.629716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.358906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT GGGTGGACAA AAACACGAGG CTGTTGGTTC AGGGTATTAC GGGTCGCGAG 
GGCCAGTTCC ATACCATCAA TTGCAAAGCC TATGGTACGA ACGTGGTCGC GGGTGTTACC
CCCGGTAAAG GCGGGCAGGC GGTCGAGGGC ATCCCGGTTT TCAACACGGT GGCAAAGGCC
GTGAAGGAGA CCAAGGCCAA TGCGGCCATG GTGTTCGTGC CGCCTCCATT TTGCGCCGAC
GCGATTCTGG AAGCCATCGA GGCCGGCATT CCCCTGATCG TGGCCATCAC CGAAGGTATT
CCGGTTATGG ACATGATGAA GGTGAAAAAT TACCTGAAGT CGAGCAAGAG CCGCCTGATC
GGGCCCAACT GCCCGGGGAT CATCACCCCC GGCCAGTGCA AAATCGGCAT CCAGCCGGGC
CACATCCATA CGCCCGGTCC CGTCGGCATC GTCTCCCGCT CCGGAACCTT GACCTATGAA
GCCGTGCACC AGATCGGAAA AGTGGGCATC GGACAGAGCA CGGTTATCGG GATCGGCGGA
GACCCGGTGA ACGGCACCAA CTTTATTGAC TGCCTCGACG CATTCCAGAA GGATCCTCAG
ACGAAGGCCA TCATTATGGT CGGTGAAATC GGGGGTTCCG CGGAAGAAGA CGCGGCGGAT
TTCATCAAGA AGAACGTGAC CAAGCCGGTG ATCGGTTTCA TCGCTGGTCT GACGGCACCT
CCGGGACGCA GAATGGGCCA TGCGGGCGCC ATCATCAGCG GTTCCAGCGG AACGGCCCAG
GGCAAGATCA AAGCCATGCG CGCGGCGGGC ATCACGGTTG TGGAAAGCCT CGGCGACATG
GGACAAATCG CCAAGGAGGC GTTCAAGAAG GTCCTGTCAT AA
 
Protein sequence
MSIWVDKNTR LLVQGITGRE GQFHTINCKA YGTNVVAGVT PGKGGQAVEG IPVFNTVAKA 
VKETKANAAM VFVPPPFCAD AILEAIEAGI PLIVAITEGI PVMDMMKVKN YLKSSKSRLI
GPNCPGIITP GQCKIGIQPG HIHTPGPVGI VSRSGTLTYE AVHQIGKVGI GQSTVIGIGG
DPVNGTNFID CLDAFQKDPQ TKAIIMVGEI GGSAEEDAAD FIKKNVTKPV IGFIAGLTAP
PGRRMGHAGA IISGSSGTAQ GKIKAMRAAG ITVVESLGDM GQIAKEAFKK VLS