Gene Sfum_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1685 
Symbol 
ID4460007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2064466 
End bp2064975 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID639702454 
Productcytidyltransferase-like protein 
Protein accessionYP_845807 
Protein GI116749120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCCG CCGATAAAAT CACAGACCTT CGCGAGCTCC AGGCTGTCTG TTCCCGCCAT 
CGCCAGGAAG GCAGGCGCAT TGTCTTCACC AATGGCTGTT TCGACCTGCT TCACCTGGGC
CATGTACGCT ACCTCGAGGA GGCGCGCTCC CTTGGAGACG TGCTCATCGT CGGCGTCAAC
ACCGACCGTT CCGTGAGTGA GATCAAGGGG CCACGACGTC CCGTGACCGG CCAGGCGGAG
CGAAGTGAAG TCCTCGCGGC GCTCCAGTGC GTCGACCATG TTGTCCTGTT TGACACCCCC
GACCCATTGC CTCTGATCGT CGCCCTCGAG CCGGATGTCC TGGTCAAGGG GGCGGACTGG
GCGGAGGGCC GGATTGTCGG CGCCGATGTC GTAACGGCAA AGGGAGGGCG GGTGGTTCGC
ATTCCGTTGA TCCCGAATGC GTCCACCACG TCGATCATCG ACAGGATCCT GGAACGCTTT
GGGATGGGCA GGACGCTTTC TGAGGTGTAA
 
Protein sequence
MRAADKITDL RELQAVCSRH RQEGRRIVFT NGCFDLLHLG HVRYLEEARS LGDVLIVGVN 
TDRSVSEIKG PRRPVTGQAE RSEVLAALQC VDHVVLFDTP DPLPLIVALE PDVLVKGADW
AEGRIVGADV VTAKGGRVVR IPLIPNASTT SIIDRILERF GMGRTLSEV