Gene Sfum_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1683 
Symbol 
ID4460005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2062029 
End bp2063330 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID639702452 
Productphenylacetate--CoA ligase 
Protein accessionYP_845805 
Protein GI116749118 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR02155] phenylacetate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACA ACATGGAGTA CGAGACAATG CCGCGGGAGG CGCTCGAGGC CATTCAGCTG 
CGCCGCCTGC AATCCACCCT GGAAAAGGTT TACGCGACGG TGCCCTTCTA TCGTCGGAAA
TTCCAGGAGG TGGGAATCAC GCCGGCCGAC ATCAAGAGCC TTCGGGATCT GCGCCGTCTT
CCATTCACGT ACAAGCAGGA TTTGCGCGAC AATTATCCGT ATGGAATGTT TGCGGTGCCC
ATGGACAACG TCGTTCGCAT TCATGCTTCG TCGGGAACGA CCGGCAAGCC CACCGTGGTG
GGGTATACCG CCAGGGACAT CCTCACGTGG TCCGAGTTGA TGGCGCGCGC CCTTGCCGCC
GGAGGCGCCT CGCGCGGCGA CATCATTCAT AACGCTTACG GGTACGGCCT TTTCACGGGG
GGACTCGGGA TCCATTACGG GGCCGAACGG CTCGGGGCTT CGGTGATCCC TATCTCCGGC
GGCAATACCA AGCGCCAGAT CATGATCATG AAGGATTTCG CACCCACAAT CCTGACCTGC
ACGCCGTCCT ATGCCCTGCA TCTTGCCGAA GTCGCCCGGG AAGTCGGAGT CGATTTCAAG
GACCTGCATT TCAAGTCGGG GATCTTCGGC GCCGAACCCT GGTCCGAGCA GATGCGTGAG
GAAATCGAAC GCAAACTCCA TCTGAATGCA CTCGACATTT ACGGCCTCAG TGAAGTGATC
GGACCGGGGG TGTCCATAGA ATGCCTCGAG GCCAAGAAGG GCCTCCACAT TTTCGAGGAT
CATTTCATCC CCGAGATCAT CGACCCGGTC ACCGGTGAGA ATCTGCCTCA CGGCGAAAAA
GGCGAGTTGG TGTTCACCTC GATCACCAAG GAGGCTTTCC CGATCATCCG CTACCGAACC
CGGGACGTGA CGTCGCTCAA TGCCGAACCG TGCATCTGCG GGCGCACGCA CATCAGGATG
CATCGTGTGA GCGGGCGTAC CGACGACATG TTGATCATCC GGGGGGTCAA CGTGTTCCCG
TCGCAGATCG AGAGCGTTCT GATGGAGACG GAAGGGGTCG AGCCCCACTA CCAGCTCGTC
GTGGATCGCG AGGACAATCT GGATATCCTT ACGGTGTTGG TGGAGGTCGG CGAGCTGCTC
TTTTCGGACG AAGTCCGCAG GTTGCAGCAA CTGGAGAAGG CCATCGCCAA AAACATCAAG
GAGTACCTGG GAGTATCCGC CAAGGTGAAA TTGGTTGAAC CGAAAAGCAT CGCCAGAAGC
GAAGGCAAAG CCGTTCGGGT CATCGACAAT CGGAAGATTT AG
 
Protein sequence
MIHNMEYETM PREALEAIQL RRLQSTLEKV YATVPFYRRK FQEVGITPAD IKSLRDLRRL 
PFTYKQDLRD NYPYGMFAVP MDNVVRIHAS SGTTGKPTVV GYTARDILTW SELMARALAA
GGASRGDIIH NAYGYGLFTG GLGIHYGAER LGASVIPISG GNTKRQIMIM KDFAPTILTC
TPSYALHLAE VAREVGVDFK DLHFKSGIFG AEPWSEQMRE EIERKLHLNA LDIYGLSEVI
GPGVSIECLE AKKGLHIFED HFIPEIIDPV TGENLPHGEK GELVFTSITK EAFPIIRYRT
RDVTSLNAEP CICGRTHIRM HRVSGRTDDM LIIRGVNVFP SQIESVLMET EGVEPHYQLV
VDREDNLDIL TVLVEVGELL FSDEVRRLQQ LEKAIAKNIK EYLGVSAKVK LVEPKSIARS
EGKAVRVIDN RKI