Gene Sfum_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1628 
Symbol 
ID4460065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1994922 
End bp1996205 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content58% 
IMG OID639702397 
ProductATPase with chaperone activity 
Protein accessionYP_845750 
Protein GI116749063 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.606792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAG CCAATTCAGC CGAAAACCCG GCGGGCTTCG CTCACAGAGC CGCCATTACC 
CTGCAGGAGC TGGACATCCC GGAGGCGATC GTCACCGAAC TGATGGTCCG GCGCATTTAC
ATGGATGACA AAAGCGATAT CGAATCCATC AGCCGAGCGC TCCGGCTGTC TTTTCCCGTG
GTTCACTCCA TCTTTCAGCG ACTGCGCGAA CAGCAGCTCA TCGAAGTGAC CGGCATGTCC
GGGAACAATT ACAACTTCTG CCTCACTTCC GCCGGCCGCG AGCTGGCCGA AAGGCGACTC
AAAGTCTCCC AGTACTGCGG ACCCGCCCCC GTTTCGCTGC AAAGCTACAC GGCCATGGTC
AAAGCACAGA TTCCAAAGCG GGCACTCACT CGGGAGCAAC TGAAAACAGC AATGTCCGAT
CTCGTGGTGA CCGAGGAATT CCTGGATCAA CTCGGCCCCG CGCTGATTTC ACAATCGTCG
CTGTTCCTCT ATGGCCCCAC CGGTAACGGG AAAACGAGTG TCGCGGTGCG TTTGCAGAGG
GTCTATCGAG ACCCGATACT CATTCCTTAT GCGGTGGAGT TTGACGGTAA AATCATCGTC
CTCTACGATC CCGCCGTTCA CAACAAGGTC GATGACGGCG AAAACGGCAA GGAGGATCTC
CGCTGGGTGC TCTGCGAGCG CCCCTGCATA GTGGTCGGGG GAGAGCTCGA CATATCCATG
CTGGAACTGC AGCTGGATGC CAACTCGGGG GTTTACGCGG CCCCGGTTCA GATGAAAGCA
AACAACGGTA TTCTTGTCAT CGACGACTTC GGCCGGCAGA TCGTCGCTCC CCGCAATCTG
CTCAACCGTT GGATCGTGCC GCTGGACCGC CGCGTCGACT ACCTGGCCCT CAGCTACGGT
GTGAAATTCC AGATCCCTTT CGCCACGATG GTTGTTTTCG CTACTAATCT CGACCCCCAG
GAACTGGCCG ACGAAGCGTT TCTCCGGCGG ATCCGCAACC ATGTTTACGT GGAACCGTGC
AAACCGGATT TGTTCGACAG AATTTTCGAC AGGCTTGTGG TGGAGAACAA GCTCTCCAGT
GAGCCGGGAA GCGCCGAGCG GCTCCGCGCA CTGTGCCTGC AGGCCTCGGG CGGTCAGCTT
CGCGCATGTT ATCCTCTTGA TATCTTAAAT ATTATCGCCT CCATCAGCGC ATATGAGCAG
CGCCCGATCC ATATCACCAA GGCCGACCTG GAGCGGGCGG CCTCCATTTA CTTTACGAAA
AGGCTCAGTC GCTCGGCGGA TTGA
 
Protein sequence
MDRANSAENP AGFAHRAAIT LQELDIPEAI VTELMVRRIY MDDKSDIESI SRALRLSFPV 
VHSIFQRLRE QQLIEVTGMS GNNYNFCLTS AGRELAERRL KVSQYCGPAP VSLQSYTAMV
KAQIPKRALT REQLKTAMSD LVVTEEFLDQ LGPALISQSS LFLYGPTGNG KTSVAVRLQR
VYRDPILIPY AVEFDGKIIV LYDPAVHNKV DDGENGKEDL RWVLCERPCI VVGGELDISM
LELQLDANSG VYAAPVQMKA NNGILVIDDF GRQIVAPRNL LNRWIVPLDR RVDYLALSYG
VKFQIPFATM VVFATNLDPQ ELADEAFLRR IRNHVYVEPC KPDLFDRIFD RLVVENKLSS
EPGSAERLRA LCLQASGGQL RACYPLDILN IIASISAYEQ RPIHITKADL ERAASIYFTK
RLSRSAD