| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1614 |
|---|
| Symbol | |
|---|
| ID | 4460081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1968559 |
|---|
| End bp | 1969761 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639702381 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_845736 |
|---|
| Protein GI | 116749049 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGGT TCATCTATCG GTTGCGCGAA GCCGGAATCC CGGTGAGCGT GCAATACATC
ATCGAATTCT ACCAGGCCCT TCAGCGAGGG CTGGCGTCGA ACCTCGACCG GCTGTTCCTC
GTGGCGCGTC TCTATTTCGT AAAGCGCGTG GAACACTACG ACGCCTTCGA ACAGGTGTTC
GCGTCATACT TCATGGGCGC GGCGCCGTCC GGAGCGGGCG CCACCGACTG GGAGGAATTG
TTTGCCGGGA AACCTTTCCG GGACTGGCTG GAGGAGGAGA TCGAGAGCGG CCGGCTGACT
CCCGAGATGA TCCGGCAGTT CGACACGGAG GAGCTTCTGG CCCGTTTCTG GGAAACCGTT
CTGGCCCAGC AGGGCAAGCA TCGGGGCGGC AACCGCTGGG TCGGCACGGG CGGCGGGTCG
CCCTTCGGTC ACGGCGGCAG ACACGCGGGC GGCATCCGGG TCCACGGCCG GGGTCTCTAC
GGGACGGCCC AGAAGGTGAT CGGCGACCGG AGGCACATCA ACTACAGCGA CAAATCCGTT
CTTTCCACGG AAAACCTCCG CCAGGCGCTC ACTTCGCTCA AATCCATGAG ACCCGCCGGG
GCGGAAACCG AGCTGGACAT CGACGAAACC ATCGCCCGCA CCGCCAAGAA CGCCGGCGAA
ATCGAGCTGA TCTTCCGGCG CGAGCTGCGC AACCGGTTGA GGCTCATCGT CCTGCTCGAC
AACGGCGGCT ATTCCATGAT GCCGCACGTG TCGCTCGTGA AGACCGTCTT CAACAAGATC
CGGGATTCCT TCCGCGACGT CGCCTACTAC TATTTTCACA ACTGCATCTA CGGCACGGTC
TACCGGGACG CGCCGCGGAC CGTCCCGATC CGGTGGGAGA AGTTGTTGTC GGAAAGCAGG
AGCACTCGCC TGGTGATCAT AGGGGACGCC AACATGGCCC CTTATGAATT GAGCGCGTCC
TACGGTTCCA TCGACGTGTT CACCACGGAG CGAAGGCCCG GCTGGGAATG GTTGAAGGAG
CTGCGCAGCG CGTTCCCCGC GAGCGTGTGG CTCAATCCCA TCGCCCGGGA GCGTTGGGAG
TATGAAAGCG TCACCATCGC CCGGATCGGG AAGATCTTCC GGATGGAGGA TCTGACCCTG
GCCGGGATCA AGAATGCCGT GGCCTATCTG AACGTTCAGG GCCAGGCGTT CGACGGACAC
TGA
|
|---|
| Protein sequence | MIGFIYRLRE AGIPVSVQYI IEFYQALQRG LASNLDRLFL VARLYFVKRV EHYDAFEQVF
ASYFMGAAPS GAGATDWEEL FAGKPFRDWL EEEIESGRLT PEMIRQFDTE ELLARFWETV
LAQQGKHRGG NRWVGTGGGS PFGHGGRHAG GIRVHGRGLY GTAQKVIGDR RHINYSDKSV
LSTENLRQAL TSLKSMRPAG AETELDIDET IARTAKNAGE IELIFRRELR NRLRLIVLLD
NGGYSMMPHV SLVKTVFNKI RDSFRDVAYY YFHNCIYGTV YRDAPRTVPI RWEKLLSESR
STRLVIIGDA NMAPYELSAS YGSIDVFTTE RRPGWEWLKE LRSAFPASVW LNPIARERWE
YESVTIARIG KIFRMEDLTL AGIKNAVAYL NVQGQAFDGH
|
|---|
| |