Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1599 |
Symbol | |
ID | 4460099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1949767 |
End bp | 1950510 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639702366 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_845721 |
Protein GI | 116749034 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCAA TGAAGAACTT TCACATTTCA TGCGGACTGT TTCTGTTCCT GATCCTGGCA TCCATGTGGT GCGGAACGGC GCGCGCGAAC CAAGCTGCGC TCCTGTCCGA GATCCTGAAA AAGACGGAGG CCAACTATCA GAAGATACAG GCATTTACAG CCAATTTCCA CCAATCGACC ACGTCGTCGG CCGCGAGCAC GATGACGACT ACGCAGGCAT CGGGTAAATT GTTCTACGAG AAGCCGCGGC AGATGCGTTG GGAATATGAG AAACCCGAAC CCCAGGTGTT CGTCGCCAAT CGTGACCTCG CCTGGCTTTA TGTCCCCGCG GACAAGCAGA TCTCGCTCTT CGACGCCAAG ACTCTCTTCG CTTCGCCGCT GGCCCAGACG TTTTTCGACG GCATGGTCGA GCTCAAGAAG CACTTCCAGG TCAGCCTCGA TCCCAAGCAG TCCAGCAAGG CGACGGCCGT CCTGAGGCTG GTCCCGAAGC AGGAGGATCC CAACATCAAG GCACTGTTCC TCCGCATCGA CCTGCAGACC TACAAGATCA TCACCATCGA AAGCCACGAT GCCCTGGGCA ACGCCAACCG CATCATGCTG GACTCTCAGA ATTCCGTGCC GCAACTCGAC CGGAAGCTCT TTGAACTCGA TACTCCTCCC GGCGTCACCG CCACCGATAT GGACGGCCGG GAACTGAGCC CGGCTGAGAT CGATAACCTC AAACAGAAGC TCCAATCCAA GTAG
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Protein sequence | MRAMKNFHIS CGLFLFLILA SMWCGTARAN QAALLSEILK KTEANYQKIQ AFTANFHQST TSSAASTMTT TQASGKLFYE KPRQMRWEYE KPEPQVFVAN RDLAWLYVPA DKQISLFDAK TLFASPLAQT FFDGMVELKK HFQVSLDPKQ SSKATAVLRL VPKQEDPNIK ALFLRIDLQT YKIITIESHD ALGNANRIML DSQNSVPQLD RKLFELDTPP GVTATDMDGR ELSPAEIDNL KQKLQSK
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