| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1579 |
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| Symbol | rpsM |
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| ID | 4460114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1930015 |
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| End bp | 1930389 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639702346 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_845701 |
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| Protein GI | 116749014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00743687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCACGCA TTGCAGGTAT CGACCTACCC AAGAACAAGC GCATCGAGAT CGCTCTGACT
TACATCTACG GTATCGGTCG CCCCACGGCT CAGAAGATCC TGGAGCAGGC AAACATCGAT
GGGAACACCA AGAGCGATGA CTTGACCGAA AACCAGATCA ACAGCATCCG TCACGTCATC
GACAGCCACT ACAAGGTGGA AGGCGATCTG CGCACCGAAG TGTCCATGAA CATCAAGCGC
CTCATGGACC TCGGCTGCTA CCGCGGCCTG AGGCATCGCC GAGGTCTGCC TGTTCGCGGA
CAGAGAACCC ATACCAACGC CCGCACCCGG AAAGGCCCGC GCCGGTCCGT CATGGGCAAA
CGCAAGAAGG CATAG
|
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| Protein sequence | MARIAGIDLP KNKRIEIALT YIYGIGRPTA QKILEQANID GNTKSDDLTE NQINSIRHVI
DSHYKVEGDL RTEVSMNIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGPRRSVMGK
RKKA
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