| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1552 |
|---|
| Symbol | |
|---|
| ID | 4461097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1915080 |
|---|
| End bp | 1915550 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639702319 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_845674 |
|---|
| Protein GI | 116748987 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00138461 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.948328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGGA GAAGAGAAGT TCCGAAACGC TATGTCTTGC CGGATCCGAA GTACAACAGC
AAGTTGGCGG CCAAATTCAT CAACAACCTC ATGCGCCGGG GCAAGAAGAG TCTGGCGGAG
CACGTTCTGT ACGGGGCACT GGACCTTATC GAGCAGCGCT CCAAGCAGGA CCCTCTGGAC
CTCTTTCACA AAGCCATGGA AAATGTGAGG CCCGTCGTCG AGGTGAAGTC CAGACGAGTG
GGCGGCGCCA CCTACCAGGT TCCGGTGGAG GTTCGTCACG AACGTCGGGA CGCGTTGGCC
ATGAGATGGA TCATCAACTA CGCCAAGCAG CGTACCGAAA AGACGATGAT CCAGAGGCTT
GCCGGTGAGC TCCAGGATGC GGCCCAGAAT CGCGGCGGCT CAGTGAAAAA GAGAGAGGAT
ACTCACCGCA TGGCCGAGGC AAACAAGGCA TTCGCGCATT ATCGGTGGTA G
|
|---|
| Protein sequence | MPRRREVPKR YVLPDPKYNS KLAAKFINNL MRRGKKSLAE HVLYGALDLI EQRSKQDPLD
LFHKAMENVR PVVEVKSRRV GGATYQVPVE VRHERRDALA MRWIINYAKQ RTEKTMIQRL
AGELQDAAQN RGGSVKKRED THRMAEANKA FAHYRW
|
|---|
| |