| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1546 |
|---|
| Symbol | |
|---|
| ID | 4461091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1903990 |
|---|
| End bp | 1904694 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702313 |
|---|
| Product | ribosomal protein L1 |
|---|
| Protein accession | YP_845668 |
|---|
| Protein GI | 116748981 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.826154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC ACGGGAAAAA ATATCGCGCC GCTCGCGCAA CGATAGACCC TGCAAAGCGC
TACACCTTCC AGGAGGCCTT GGAGCTGGCA ACCGGGTCGA TCTTCTGCAA GTTTGACGAG
ACACTTGATA TCGCAGTCCG CCTGGGCGTC GATCCGAGGC ATGCAGACCA GATGGTGCGC
GGCACCGTGG TTTTGCCCAA CGGGCTGGGA AAGCCCGTCC GAGTCCTGGT GTTCGCCAAG
GGCGAAAAGG TCAAGGAGGC GCTCGACGCC GGTGCGGACC ACGCGGGCGG CGACGAACTG
GTCGATCGGA TCAAGGAAGG CTGGCTCGAA TTCGACAAGA CGGTCGCAAC CCCCGACATG
ATGGGTGCGG TCGGCAAGAT CGGCAAAGTG CTCGGCCCCC GCGGCCTCAT GCCCAATGCC
AAGCTGGGAA CGGTCACCTT CGATCTGCAG AAGGTGGTCA AGGAGATCAA GGCCGGAAAG
GTCGACTTCC GGGTGGAAAA AACCGGGATC GTACATGCTC CGATGGGCAA GGTCTCCTTC
GGGCAGGAGA AGCTGATCCA AAACATTTCC GCCTTCATCG ACACGCTCAT TCGGCTCAAA
CCGACGGCGG CCAAGGGAAC CTACGTGCGG GGGATCGCCA TCTCCACCAC CATGGGGCCT
GGGATCCAGA TCGACCCGCT GGCGGTAAAG ACGATCGTGG CTTGA
|
|---|
| Protein sequence | MAKHGKKYRA ARATIDPAKR YTFQEALELA TGSIFCKFDE TLDIAVRLGV DPRHADQMVR
GTVVLPNGLG KPVRVLVFAK GEKVKEALDA GADHAGGDEL VDRIKEGWLE FDKTVATPDM
MGAVGKIGKV LGPRGLMPNA KLGTVTFDLQ KVVKEIKAGK VDFRVEKTGI VHAPMGKVSF
GQEKLIQNIS AFIDTLIRLK PTAAKGTYVR GIAISTTMGP GIQIDPLAVK TIVA
|
|---|
| |