Gene Sfum_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1545 
Symbol 
ID4461090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1903515 
End bp1903937 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content58% 
IMG OID639702312 
Productribosomal protein L11 
Protein accessionYP_845667 
Protein GI116748980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.42039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.523061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AAGTAGTCAC CAACATCAAG CTGCAGGTAC CGGCAGGACA GGCGAATCCA 
TCGCCTCCCA TCGGCCCCGC GCTCGGCCAG CACGGGGTCA ATATCATGGA GTTCTGCAAG
GCCTTCAATG CCAGAACCCA GGGACAGGAA GGAATGATCA TCCCGGTCGT GATCACCGTG
TATGCTGATC GCTCTTTCAC GTTCATTACC AAGACCCCTC CGGCCGCCGT GCTGCTCAAG
AAAACGGCCC AGATCGCCAA GGGTTCCAAC GAGCCGAACC GGACCAAGGT GGCCAAAGTG
ACCAGGGCCC AGGTGGAGGA AATCGCCAAG TTGAAGATGC CCGACCTGAA CGCCAGGGAC
TTGGATGCAG CCGTTCTCAC CATCATGGGA ACCGCCCGCA GCATGGGGAT CGAGGTCGAA
TAG
 
Protein sequence
MAKKVVTNIK LQVPAGQANP SPPIGPALGQ HGVNIMEFCK AFNARTQGQE GMIIPVVITV 
YADRSFTFIT KTPPAAVLLK KTAQIAKGSN EPNRTKVAKV TRAQVEEIAK LKMPDLNARD
LDAAVLTIMG TARSMGIEVE