Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1538 |
Symbol | |
ID | 4460623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1898528 |
End bp | 1899412 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639702304 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_845661 |
Protein GI | 116748974 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.515711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGGT TGCTGTTGAC GGGGGCGAGC GGGCTTCTGG GCTGGAATGT CTGCCGGCTG AAAAGGGACC GGTGGGAAAT CCACGGGGTG GCCCACCGAC ATCCCATCGC CATTGACGGG GTCCGGGGCC ACGTCGTCGA TCTCACCGAT CGCGCGCAAA CCGCCGACAT GTTCCGGAGG CTCAAACCCC GGGCCGTCAT TCACGCCGCC GCGGCGACCA ATGTCAACTG GTGCCAGGAA AACCGGGCGG AGTCGTATAG AATCAATGTC GAGGCGCCGT TCCACATCGC CGCGCTTTGT GCCGAATCAG CCATCCCTTA CCTATTCATA TCATCCGACA TGGTTTTTGA CGGGTTGAGC CCCCCGTACG GGGAACGGGA CCCTGTTTCT CCGGTCAACG TTTATGGCGA ACAGAAGGCG CGGGCCGAGG AAATGGTCGC CGCGGAATAT CCGAACGCGG TCATCTGCCG CCTGCCCTTG ATGTTCGGGG AACCGGGGCC TTTCTCGTCC GGTTTCGTTC AGCCCATGAT CGAGGCGATG CGGTCCGGAC GCGAGCTGCC GCTGTTCACG GATGAGATCA GGACTCCGGT GAGCGCTGAA TCGGCGGTGG AGGGAATTTT CCTCGCGCTG CGGCAAACCG GAGGGATCCT CCACCTGGGG GGCCGGGAAC GGGTCTCGCG GTACGCATTC GGTCTTTTGC TGGCGCGCCT GGCGGGTTTC GGGGAGGCTG GGCTGCGGGC CTGCAGACAG CGGGACGTCA AAATGCCCGC GCCACGCCCA CGCGATGTTT CCCTGGACAG CACCAGGGCC TTCAGCCTCG GGTATTCGCC CGGCAGGATC GAGGACGAGC TGCGGAGGTT GCTCGCCTCC AGCCCGTTGC GATGA
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Protein sequence | MKRLLLTGAS GLLGWNVCRL KRDRWEIHGV AHRHPIAIDG VRGHVVDLTD RAQTADMFRR LKPRAVIHAA AATNVNWCQE NRAESYRINV EAPFHIAALC AESAIPYLFI SSDMVFDGLS PPYGERDPVS PVNVYGEQKA RAEEMVAAEY PNAVICRLPL MFGEPGPFSS GFVQPMIEAM RSGRELPLFT DEIRTPVSAE SAVEGIFLAL RQTGGILHLG GRERVSRYAF GLLLARLAGF GEAGLRACRQ RDVKMPAPRP RDVSLDSTRA FSLGYSPGRI EDELRRLLAS SPLR
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