Gene Sfum_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1525 
Symbol 
ID4460610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1884370 
End bp1884915 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID639702291 
ProductMucR family transcriptional regulator 
Protein accessionYP_845648 
Protein GI116748961 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000012221 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAA AATTGGTGGA AATCAGTGCG GACATCATCC AAAACCAGGT ATCCACAACT 
CCGATGTCTC CTGATGAACT AGTATTGTCC TTGCAGAAGG TTTTTAGGGC ACTTCAGGAC
ATGCAGAAGT CGGAGACGGA CGGAACAGTA TTGGATCTGG CCAGACCATT GGAAGAGGGC
TCTGAAGAAA GCGGCCCGCC GCAGCTTTCA CCCCGCGAAT CCATTCAGCA GGACAAGATC
GTGTGCCTCG AATGCGGGGC GGAGATGCGC CAGTTGACGG CCAGGCATTT GGTTTCACAC
GAGTTGACTC CGCGAGAATA CCGAAAGAAA TACGGGTTCA CGATGCGGAC TCCCCTGTCG
GCGAAGTCTC TGACCAAGGC GAGGAGCAAG GCCGCCAAGA AGCGGGGACT GCCGGAGAAA
CTGGTGCAGT TCCTCGAGGC CAAGAAGCAG CAGAAGGCCG CGGCGGTAAT GGAAGGCTCA
CCCGCGGAAG ACTCCCTGAC GGACAAGGCG TCCAAGATCC CCAGGAGAAA GAAAAGCGCT
CCCTGA
 
Protein sequence
MTRKLVEISA DIIQNQVSTT PMSPDELVLS LQKVFRALQD MQKSETDGTV LDLARPLEEG 
SEESGPPQLS PRESIQQDKI VCLECGAEMR QLTARHLVSH ELTPREYRKK YGFTMRTPLS
AKSLTKARSK AAKKRGLPEK LVQFLEAKKQ QKAAAVMEGS PAEDSLTDKA SKIPRRKKSA
P