| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1493 |
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| Symbol | |
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| ID | 4461463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1849388 |
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| End bp | 1850836 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702260 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_845617 |
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| Protein GI | 116748930 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAGCA GGCTGGGTTT GGTGGGGTTC GTGAAGGCAT CCATGGTCCT TGCCTTCTCT
CTGGTGTTGA TCTCTTCTTC CGCGCTCCAC GCCGCCGGGC CGGTCAAGGT GGTCACGGGG
GAACATGCCG CGAGGAAGAT TCACCTCCAG GTGGGCAAGT CGGTCATCGT GCGGAGCGGC
GCCCCGGTGG TGCGCACCAC CCTGGGTTCC CCGGACGTCG CCGACATCGT GGCACTCTCC
CCGACGCAGA TTTATATTAC CGGCAAGGCC ACCGGGGTGA CGAACCTCAC TCTGTGGCAG
AGCGACGACA AGGTGTCCGC GATCTATGAC ATCGAGGTGG CCCCGGACAC CATGCGGCTC
AAGGAGAAGC TGCACGAGGT CCTTCCCGGA GAACGGGACA TCAAGGTTTC CGCCTCCCAT
GACTCGCTGA CCCTCTCGGG AACGATCTCC AGCTCGACCC ATCTCGCCCA GGCCATGACG
CTTGCCGAGG CGTACAGCGG CGGGAAAAAG GTGATCAACC TGCTCCAGGT GTCGGGCGTG
CACCAAGTGA TGCTGGAAGT GCGCGTGGCG GAAATGTCGC GCACCCTCAC CAACCGGCTG
GGAATCAATT CCATCTGGAA CGTGAACGGG AGCATGGGGG CTTCGCTGCT CGGGAACCTG
GCTTCCCTGG ACAAGTTCGC CGGGTCCGCC TCCGGGTCCA GCAGTGAGTT CACCTTCGCG
CCCACGGTCA ACTCGCTGTT TCACATCCTC GGGGGACCGT TCACCTGGAC GGCGTTCATC
GACGCCCTCA AGGAAGACGG CCTCGTCAAG GTTCTTGCCG AGCCGACGCT CATCGCCATG
AGCGGCCAGT CGGCCAGCTT CCTGGCCGGG GGGGAGTTTC CCATCCCCGT GCCGCAGGGG
CTCGGGACCG TGGGAATCGA GTACAAGCAG TTCGGCGTCA GCCTGGCCTT CACGCCGACG
GTGCTCAACG ACAAGCGGAT GAACATCATC GTCGCCCCCG AGGTGTCGGA GCTCGACTAC
ACCACGGCGA TCAACATAGC CGGGGTTGCC GTCCCGGGTC TCACCACCAG GAAGGTCTCC
ACGGCCATCG AGTTGAACGA CGGTCAGAGC TTCGCCATCG CGGGGCTGCT CAAGGACACC
ATCCGGGAGG ACGCGAAGAA ATTCCCGATC CTGGGAAGCA TTCCGGTGCT GGGAGCGCTT
TTCCGCAGCG TTTCCTTCCA GAGAAACGAG ACGGAACTGA TCGTAATCGT CACGCCGCGG
CTGGCGAAGC CCATAGACGT GGCCACCCAG CCGCTGCCGA CGGACAAGTT CATCGAGCCC
AGCGATTCGG AGTTCTTCTT CCTGGGCCTG TTGCAGGGGC GAGCCCCAAA GCCGGCGCCG
CGCGCGCCGC TGCCGATCAC CGACAAAAAA GCGGGGTTCG ACGGGGAATT CGGCCACACC
GTGCCGTAG
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| Protein sequence | MCSRLGLVGF VKASMVLAFS LVLISSSALH AAGPVKVVTG EHAARKIHLQ VGKSVIVRSG
APVVRTTLGS PDVADIVALS PTQIYITGKA TGVTNLTLWQ SDDKVSAIYD IEVAPDTMRL
KEKLHEVLPG ERDIKVSASH DSLTLSGTIS SSTHLAQAMT LAEAYSGGKK VINLLQVSGV
HQVMLEVRVA EMSRTLTNRL GINSIWNVNG SMGASLLGNL ASLDKFAGSA SGSSSEFTFA
PTVNSLFHIL GGPFTWTAFI DALKEDGLVK VLAEPTLIAM SGQSASFLAG GEFPIPVPQG
LGTVGIEYKQ FGVSLAFTPT VLNDKRMNII VAPEVSELDY TTAINIAGVA VPGLTTRKVS
TAIELNDGQS FAIAGLLKDT IREDAKKFPI LGSIPVLGAL FRSVSFQRNE TELIVIVTPR
LAKPIDVATQ PLPTDKFIEP SDSEFFFLGL LQGRAPKPAP RAPLPITDKK AGFDGEFGHT
VP
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