Gene Sfum_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1480 
Symbol 
ID4461450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1836770 
End bp1837675 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID639702247 
Producthypothetical protein 
Protein accessionYP_845604 
Protein GI116748917 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.900362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAT TTGCGGATTA TGCACTCCGG GCACTCGGGG TCAGGCTTCC CGAAGACTAC 
GCCCGGTTCA TGGATATTCA TGGAAAGAAG CTCTCGGATG ATCCCGTCCG TGCGCAGAGC
TGGCTCCAGG GGCTTGGGTC CGCGCATTTC GTGGTCGGGA CCACCCTCGC CTTCCGCTCC
AGGCTGCCCG GTTTTCGCCT CGAGAACGTG CTGATCGGCT ATGCCGGCCT CAAAACCATC
GTCATCAACA AGGTGTACGA GGAAATCGAC GAATACTTCA TGCTGGACAC CCGGGAGGGG
AGCGTCCACG CGATCGACTC TTTCGGAGCC GCAAACCGGC TTGCGGAGAG CTTCGAGGAG
TGGATCGGCC CGGAGCTTCT GAGGGCCGTG CTCAAGGAAC AATACAAGAG CAGCCTCACC
GTCGTCATCT TCGATGACGA ACAGAAGGCC GAAGAGGCGC GCCTGAAGCT TTTGGAACTC
CGGCGCGGGG GTTTCGTGGA ACTGGAGGAT GCCGTGGTCG TGGTGAGGGG ACAGGACGGC
ACGGTCCGGC ATCACCAGAT GCACAAGCTG ACGCGAAAGG GAGGGATCGC CGGGAGCATC
ACGGGGCTCA TCGTCGGCAG CATCTTTTTC AGCCCCGTGA TCGGAGCGGT CTTCGGAGCG
GTTTCAGGAG CCCTCTCCGC ATCGCTCACC GACATCGGAA TCGACGACCG GTTCGTCGAG
GATCTGTCTC GCAAGCTCAA GCCCGGGTGC TCCGCCCTGT TCACCCTGGT GCGCAAGGCG
GACCCCGAGC GCGTGAGAGA GGCGTTCCTG GGTTTCGGGG GAAAGGTCCT CGTGAACTCG
GTGAGCAAGG AAAGGGAGAC CGTCTTGCAG GAGATCCTCG ATGCGGCCGG TGAGAAAACG
GAGTAG
 
Protein sequence
MERFADYALR ALGVRLPEDY ARFMDIHGKK LSDDPVRAQS WLQGLGSAHF VVGTTLAFRS 
RLPGFRLENV LIGYAGLKTI VINKVYEEID EYFMLDTREG SVHAIDSFGA ANRLAESFEE
WIGPELLRAV LKEQYKSSLT VVIFDDEQKA EEARLKLLEL RRGGFVELED AVVVVRGQDG
TVRHHQMHKL TRKGGIAGSI TGLIVGSIFF SPVIGAVFGA VSGALSASLT DIGIDDRFVE
DLSRKLKPGC SALFTLVRKA DPERVREAFL GFGGKVLVNS VSKERETVLQ EILDAAGEKT
E