Gene Sfum_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1474 
Symbol 
ID4461530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1830180 
End bp1830800 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content59% 
IMG OID639702241 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_845598 
Protein GI116748911 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.195699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGGC ACAAACTCCA TACCGCCGGG CGGACGGCTC ACGATCTCTA CCCGGTAAGA 
GGAAGACCTG ACATGATAGA TGCGCGAAAC TACAGAGTGG AAGACAAGCT CAAGAACGGC
GCCGTTGTGA CCATCAGGGC CATTCGCCCC GACGACAGGA ACCGGATCGT GGAGGCGTTC
GGGCACCTTG AGAGGGAAAC CATCTATTCG CGGTTTTTTC GTTACAAGAG CCAACTCACC
GATGAAGAGC TCCGCGCGTT CACGGAAGCT GATTTCAAGA ATGTCGTTGC ACTGGTGGTC
ACGATACCGG CCGGTGGAGA GGATGAAACC GTCATCGGCT CGGGAAGCTA TGTTCTATAT
GGTCCCTCAG ACGCCCAGGG CAGGGCGGAG GTTGCTTTTA CCGTCGAGGA AGACTACCAG
GGCCAGGGGA TCGCGAGCCG CATTCTGAAA CACCTCGTTG ATATCGCCCG GGAGCAGGGG
GTGCTGCGGT TCGAAGCCGA GGTGCTCGCC GAGAACCGGG CGATGCTTAC GGTCTTTGCC
CACAGCGGAC TTCCCATGAA AACGTCGCTG GAGGAGGGTG TGGTGTACGT GTCCCTTTCC
CTGCAGGCGC AGGCGTCATG A
 
Protein sequence
MLRHKLHTAG RTAHDLYPVR GRPDMIDARN YRVEDKLKNG AVVTIRAIRP DDRNRIVEAF 
GHLERETIYS RFFRYKSQLT DEELRAFTEA DFKNVVALVV TIPAGGEDET VIGSGSYVLY
GPSDAQGRAE VAFTVEEDYQ GQGIASRILK HLVDIAREQG VLRFEAEVLA ENRAMLTVFA
HSGLPMKTSL EEGVVYVSLS LQAQAS