Gene Sfum_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1445 
Symbol 
ID4460583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1789499 
End bp1790980 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content59% 
IMG OID639702214 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 
Protein accessionYP_845571 
Protein GI116748884 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01813] flavocytochrome c 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000784469 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCAGC AGATTACTCG CCGGGATATG ATCAAAGGGT GCCTCGTGGC CGCTGCCGCG 
GGCGCGATGG ACTCGGTGTC GACAACTGTG CGGGCAGCCG CCCCGGACCC TGCCGCCATG
GATTATGACG CCGTCATTTT GGGCGCCGGC ACGGCCGGGC TGGTGGCCGC TCTAGAAGCC
TACGACCAAG GCATTAAGCC CGTCGTTCTC GAAAAGATGG ATTTGCCTGC CGGCAACTCC
ATTTACGCCA TGGGTGCTCT GTGTGCTTGC GGCACCCGCG TTCAAAACCG GGAAGGCGTC
GTTGAGAGCA AGGACGATCT TTTTGCCGAC ATGATGAAGA TTTCTGTTGA CCAGGCCGAT
CCGGCTTTGA TTCGCTCCTA CGTCGAACAT ATTGGCGAAG ACGTTGACTG GTTGGAGGAC
ACCATCGGAG TGAGGTTCCG CAAGCTGGAG AAGTTGCCCT ACCCGCTGCT CAGCCGTCTT
CACTGTGTCG AAGGCGGCTC GATTACGGGC GGTGGCATGT TGATCCGTTG TCTGCTTGCA
GCCTGCAGGA AGCGCGGCAT CCCCATTCTC TACCACACCA AGGCTGTTGA ACTCATCACT
GATAAGAAGA TTGCGGTGAA CGGCGTGCGC GCTTTGACCG AAGACGGTCT GGTCGATTTC
AAGGCTCGCG GCGGTGTGTT GATCGCTACG GGCGGCTTCT CCGCCAACAG GGAAATGCTC
TGCGGCTACA TAGGCGGAGT CATGTCGCGA TTGCCTTTGC GTGGCTCCCC GACTGTCACG
GGCGAAAACA TCACGCTCAC CAGGCCCCTT TTTGCAAAAT TGGTACACAT GGACCAATTC
CATTGTGGCC CGATCGTCTC GGCGACGCAC GTAAACCCTG AAGGGGCGTT GAATAGCGGC
TACGGCATCA TCGTGGATTT GCGCGGCAAG CGCATCGTCG ACGAAGGCAG TACCTATGTG
GCCAAAGCAC GTGCTTTGCC GAACTTGACT CCGGAAAACA AGGCCTACCA ATTGGTCGAC
AGCAACTGGA CCGCCGTCGG GAAGATGGCT GACAAGTTCA CGGGCATGAA TTCGCCATTC
TTCCGGGACG ACACCGTCGC GGGTCTGGCC AGGAAAGCGG GGTTGCCCGT AGAAGCCGTT
GTGGCTGCCG TCAACGGTTA CAACGACGCG TTGAAAAAGC GCAAGTTGAA GGATTTGAAT
CCGCCGTGCA CCCGCAAGGA CCCTCACGCG ATGGACAAGA GTCCGTTCTA CGCCTTCCCG
TTTGAGAGCG GCATGACCAC CACCTTCGGG GGACCTAAGA TCAACACCAA TGCTCAAGTG
GTCAACCTGG AAGACGAGCC CATAAAGGGC CTTTACGCTG CGGGCAATGC CGCGGGTGGT
TTATTCTTTC GGGACTACGT CGGCGGCAGC CAGTTGGGCG GCGCTACGGT CTTCGGCCGT
ATTGCCGCTC GTCACATTGC TCAAGCCTGC AAGAAGGCCT GA
 
Protein sequence
MGQQITRRDM IKGCLVAAAA GAMDSVSTTV RAAAPDPAAM DYDAVILGAG TAGLVAALEA 
YDQGIKPVVL EKMDLPAGNS IYAMGALCAC GTRVQNREGV VESKDDLFAD MMKISVDQAD
PALIRSYVEH IGEDVDWLED TIGVRFRKLE KLPYPLLSRL HCVEGGSITG GGMLIRCLLA
ACRKRGIPIL YHTKAVELIT DKKIAVNGVR ALTEDGLVDF KARGGVLIAT GGFSANREML
CGYIGGVMSR LPLRGSPTVT GENITLTRPL FAKLVHMDQF HCGPIVSATH VNPEGALNSG
YGIIVDLRGK RIVDEGSTYV AKARALPNLT PENKAYQLVD SNWTAVGKMA DKFTGMNSPF
FRDDTVAGLA RKAGLPVEAV VAAVNGYNDA LKKRKLKDLN PPCTRKDPHA MDKSPFYAFP
FESGMTTTFG GPKINTNAQV VNLEDEPIKG LYAAGNAAGG LFFRDYVGGS QLGGATVFGR
IAARHIAQAC KKA