| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1420 |
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| Symbol | |
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| ID | 4461356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1762331 |
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| End bp | 1762804 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639702188 |
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| Product | hypothetical protein |
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| Protein accession | YP_845546 |
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| Protein GI | 116748859 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.290854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCC ACCTCGTGTT TGTCGGGAAA ACGGTCTTTC CGGATGTCGA AACGGGCATC
GAGCGTTACG TGTCCCGGCT CAACCACTAC CTGCCCACCC GGATTCACTA CGTCAAGGCC
GAGAAGATTC CTCCGCGGGG GATGGAATCC GCCGTCCTGG AAAAGGAATG TGAACGTATC
TTGAAGCTGA TCGGCGGGAA GAGCAATCAG CTGATCGTGT GGGACAGGAC TGGAAAGCAC
CTGGACTCGC TGGAGTTCGC ACGAGTCCTC GAGCGATTGA GCAATGGGGG CACCGGGGCG
GTTTGGATGA TCATCGGCGG GCCCCTGGGG ATTTCCCGTG AACTCAGGGA CAGGGCGAAC
CTGGTTCTGG CCTTGTCTGA AATGACCTTT CCTCACGACC TGGCCCGCCT TATCGTGGCC
GAACAGCTTT ACCGGGCATT CACCATCATC AGGGGCGAAC CCTATCACAA ATGA
|
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| Protein sequence | MQIHLVFVGK TVFPDVETGI ERYVSRLNHY LPTRIHYVKA EKIPPRGMES AVLEKECERI
LKLIGGKSNQ LIVWDRTGKH LDSLEFARVL ERLSNGGTGA VWMIIGGPLG ISRELRDRAN
LVLALSEMTF PHDLARLIVA EQLYRAFTII RGEPYHK
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