Gene Sfum_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1354 
Symbol 
ID4460524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1680406 
End bp1682031 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content63% 
IMG OID639702122 
Producthypothetical protein 
Protein accessionYP_845480 
Protein GI116748793 
COG category[S] Function unknown 
COG ID[COG4951] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.721853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AAACCTCTCC GCTTCCCAAA AAGACCGGTT CACCGGATTT CGCGCTTCTC 
CTCCAGCAGA TCGAGAAGCG CCTTCTTACG GGCTCGCAAA CCGAGCAGGC GGTCCAGATC
CTGGGACGGG AGTCCATCTG GAAAACCCTC CCCCCGGACC AGGCGCTCCG GTGGGCAAGG
CTCGCCCAGG CGGCGGGGTT GCCCGACTTG AGCCTGCAGG TTCTCTCCTG GGTGACCCAA
AGCGAACCCG GTTGCGTCGA AGCCTGGCAG CAGCGGGTCG ATCTCCTGGA GACACTTGGT
CGAAAACAGG CCGGCCCGGA AGCGGCCGCT TGCGCCGTTC GCTCCGAGAA CGCCGACGCT
TCCGGTCCAT CCCCCGGTAC CCCTTCCAGG GAAGACGGGG CACCATGGGA GGAGGTCGTC
GAAACGCCGT TCACCTCCAT GCGTTCGCGC GAGGCGGCTC TAGCGCGCTA CCTCGATCTT
TTCAGCGGTC GGGAGGACTG TTTCGCCCGC CAATGGTCGG ACAGAAAGGC GGGAACCCAG
GGGTACATAC CCGTTCGTCG TCCCATGACT TCCGAAGATG CTCTCGAGCA CATCGGGGGA
CACAGGACCT ACGGGATCTA TCTCCTGCGG CGGGACAGCC ACGTGAAAGT CGCGGTGGTC
GATGCGGACC TTGCATCGCG GCTCCGCGCG GGGCCGGTCA CATCGCGGGA CAAGGAGCTC
GTTTCCAGGG AAAAGAACTA CCTGCTCGGC CGCCTTCCCG AGATCGGCAG GGAAAAAGGT
CTTCCCTGCC TCGTGGAATT CAGCGGAGGA AAGGGTTTCC ATTTCTGGTA CCTCTTCGAG
GAGCCCGTGC CCGCAACGGA GGCTCGCCAG GTGCTCCAGG GGCTTGTCAA ACGGATCGCC
CCCGATCTGA GCTGCTTCAA CCTCGAGGTG TTTCCCAAGC AGGACCGGCT CGCCGGGAAA
GGACTGGGGA ACCTTGTCAA GCTCCCTCTC GGCATTCACC GGGTGACGGG CAAGCCGTCC
TTTTTTCTCC ACATACCGGA TCGTTCCCCG TGGGCGCAAC TGGAGGCCCT TTCCAAGGTG
AATTCCATTG GCAGGGAACC TTTCCTGGCT GCCTCTTCGT CCAGGGAGGC GGGAGAAGTC
GTGGTACATC CCAGGGAAGA AATGTGGGCG AAGGAAGTAC CGGAGCTCGC CTTCCTTGTG
GACCGCTGCA CGGCACTCGC CCAGATCGTC ACAAATTGCC GGCAGTCACG GAGCCTTTCC
GTTCGGGAGG AGAAAGTGCT CCTGGGGACC ATCGGATTCT TGCCGCGCGC CAAGACACTG
CTGCACCACC TTTTCCGGAA CCTTCCCGAG TACAATCCCC ACCTGGTGGA CTACCGCCTG
TCCCGCGTTC GCGGGTCCCC TCTCGGCTGC AAGCGCATCC ACGGCCTGCT GGACCTCGCA
TGCGACCAGT GCACGTTCCC CGACGGCTCC GCCTATCCGC ATCCCCTCCT TCACTGGCCG
CAGTGGAAGC AAGGCGCCGA AGAGCAGAAG GGGGAAAGAG TGGGCAACTT GAGGGATGCG
CTCGACCGCC TGCAGGAAGC GATCGGCGTC GTCGAGCGAT TCCTCGGGGA TGGGGCGAAC
TCGTAG
 
Protein sequence
MNAETSPLPK KTGSPDFALL LQQIEKRLLT GSQTEQAVQI LGRESIWKTL PPDQALRWAR 
LAQAAGLPDL SLQVLSWVTQ SEPGCVEAWQ QRVDLLETLG RKQAGPEAAA CAVRSENADA
SGPSPGTPSR EDGAPWEEVV ETPFTSMRSR EAALARYLDL FSGREDCFAR QWSDRKAGTQ
GYIPVRRPMT SEDALEHIGG HRTYGIYLLR RDSHVKVAVV DADLASRLRA GPVTSRDKEL
VSREKNYLLG RLPEIGREKG LPCLVEFSGG KGFHFWYLFE EPVPATEARQ VLQGLVKRIA
PDLSCFNLEV FPKQDRLAGK GLGNLVKLPL GIHRVTGKPS FFLHIPDRSP WAQLEALSKV
NSIGREPFLA ASSSREAGEV VVHPREEMWA KEVPELAFLV DRCTALAQIV TNCRQSRSLS
VREEKVLLGT IGFLPRAKTL LHHLFRNLPE YNPHLVDYRL SRVRGSPLGC KRIHGLLDLA
CDQCTFPDGS AYPHPLLHWP QWKQGAEEQK GERVGNLRDA LDRLQEAIGV VERFLGDGAN
S