Gene Sfum_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1322 
Symbol 
ID4460353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1635995 
End bp1637284 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID639702090 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_845448 
Protein GI116748761 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000848316 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000198005 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATGA TTTGGCCCCC AATTGAAGTG ATAACGATGA AGAATACAGA CGAGAATCTT 
TTGAAAACAG CCACAATAAG TCTCTTTACT GGTGCAGGAG GACTTGATCT TGGACTTGAG
GCGGCGGGTT TCTGCATTTC AATCTGTGTC GAGGTGGCGA AGGATGCTCA AGAAACACTG
AAGGTAAACC GACCCCACTG GAAACTCGCT GAACCGGGAC ATATTCACCA GATCTCCCCC
CCTGAAATTC TTGAACAGTC TAACCTTCGG AGAGGAGAGC TGGCTCTCCT TTCCGGCGGG
CCTCCTTGCC AGCCATTTTC GAAATCTGCA TACTGGACTG GTGGCCGACA AGGTCTTCGT
GACCCTAGAG CTTCTGGCTT GCGAGCTTAT TTAGATGTTG TTGAAGTAGC ATTACCGAAG
GTCATTCTGC TTGAGAATGT TAGAGGTCTA GCACCCAACG GAAATCGTGA CGGGGGGTTG
AAGCTCCTTG CAGACGGAAT TCGAGACATT AATCGAAGGC TTGGCAGTGC CTATAAACTG
CAGGTATTTC ATCTTAATGC TGTCAACTAT GGTGTACCAC AATCGCGCGA ACGGGTGTTT
CTCCTCGCAA GTATCGACGG GACGACCTTT CAGATTCCGC CTGTGACGCA TGGGTGTGGT
GACCGGTTGG AGCCGCGTGT TACTGCATGG GATGCGATAG GTGACCTTGA CTCCCCGGAA
TGGCCGTCTG AGCTTGAGCC TGCTGGTAAA TGGGCCGGAT TGCTGAAAAG CATTCCTGAA
GGAAAGAATT ACCTGTGGCA TACCAAGCGA GGTGGAGGCG CACCATTGTT CGGATGGAGA
ACCAGGTATT GGTCCTTCCT TCTGAAGCTA TCAAAGCGCC AGCCTTCGTG GACTATTCAA
GCTGAGCCCG GGCCGGCTAC TGGCCCATTT CACTGGCGCA ACCGGCGCCT CTCTATCCGG
GAACTCGCAC GGCTCCAAAC TTTTCCCGAC AATTATCAAT TCGTGGGGAA CAGGCATTCA
GTCCATCGCC AGATCGGCAA TGCCGTCCCC TGTGCCATTG GGGAGCTTCT GGGGCTTGAG
ATCAGACGGC AGTTTCTAGG GGAGCAGAAT ATCCATCGCC AGCTCAGAAT GATACCTTGT
CGTCGTGAAA ACTGCCCAGG GGAGTATCCC GTTCAACCGG TCCCCAATTC CTATGTGCAC
CTCCTTGGCG AGCATCCGGA TCATCCCGGG AGAGGACTTG GGCCTGGAAG GGTTTGGAAG
GACACAATCA AGGATGAGTC TGTGAGATGA
 
Protein sequence
MKMIWPPIEV ITMKNTDENL LKTATISLFT GAGGLDLGLE AAGFCISICV EVAKDAQETL 
KVNRPHWKLA EPGHIHQISP PEILEQSNLR RGELALLSGG PPCQPFSKSA YWTGGRQGLR
DPRASGLRAY LDVVEVALPK VILLENVRGL APNGNRDGGL KLLADGIRDI NRRLGSAYKL
QVFHLNAVNY GVPQSRERVF LLASIDGTTF QIPPVTHGCG DRLEPRVTAW DAIGDLDSPE
WPSELEPAGK WAGLLKSIPE GKNYLWHTKR GGGAPLFGWR TRYWSFLLKL SKRQPSWTIQ
AEPGPATGPF HWRNRRLSIR ELARLQTFPD NYQFVGNRHS VHRQIGNAVP CAIGELLGLE
IRRQFLGEQN IHRQLRMIPC RRENCPGEYP VQPVPNSYVH LLGEHPDHPG RGLGPGRVWK
DTIKDESVR