Gene Sfum_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1299 
Symbol 
ID4461135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1601079 
End bp1601642 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID639702068 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_845426 
Protein GI116748739 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.703155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGG GCAAAGTGGG GGTTGATCTG GGACTGTCCG CGGAAGAAAA GCAAACGCTC 
AGGCAGATTG CTTTCCAGGC CATTCGCAGC CGCTGTTTCG GCGAGCCCCT GCCCGAACCT
TCCCCGGAAT CGCCGGGGCT CAAAGAACGG CGCGGCGCTT TCGTATGCCT GCACAAAGGC
AAGGAGCTCA GGGGCTGCAT CGGCATGATC GAACCGATCG AACCCCTGTA CAAGACGGTA
CGGAACATGG CCGTCGAAGC GGCTTTCGGC GATCCGCGCT TCTGCGCTCT CCAATCGGAC
GAGCTCGACA GGGTCGACAT CGAAATATCC GTTCTCACTC GCCTCGAGCG GATCTCCGAC
ACGGAACGCA TAGAAATCGG GAAACACGGC ATCTACATCC GAAAGAATTA CCAGACGGGC
CTGCTGCTGC CCCAGGTTGC AACGGACAAT CATTGGGACA CCCGGGAGTT CCTGGAATGG
ACCTGCCGAA AGGCGGGAAT CCCGTCGGAT GCATGGAAGG ATCCCGATAC CGAGATCTAC
ATTTTTTCGG CGGACATTTT CTAA
 
Protein sequence
MHRGKVGVDL GLSAEEKQTL RQIAFQAIRS RCFGEPLPEP SPESPGLKER RGAFVCLHKG 
KELRGCIGMI EPIEPLYKTV RNMAVEAAFG DPRFCALQSD ELDRVDIEIS VLTRLERISD
TERIEIGKHG IYIRKNYQTG LLLPQVATDN HWDTREFLEW TCRKAGIPSD AWKDPDTEIY
IFSADIF