| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1269 |
|---|
| Symbol | |
|---|
| ID | 4460696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1567584 |
|---|
| End bp | 1568432 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702038 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_845396 |
|---|
| Protein GI | 116748709 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.293917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGCA GGTTTCGCAC GACAGTTCTC CTGGCGGCAC TCACCGCGTT GATCATATGG
ATCGGGGGTG CGGTCGGAGG TTCTCACGGC ATGATGATAG CCTTCGTTTT GGCGCTCGTC
ATGAACGTGG GCAGTTATTG GTTCTCGGAC AAGATCGTTT TGGCCATGTA CCGGGCGCAG
CCGTTGAGTG AGGCCGACGC CCCGCAGATT TACCGGATTG TCAGAGAGCT CTCCGCGTCG
GCCAACCTGC CGATGCCGAG GGTCTACCTG ATTCCGGAAT CCGCGCCGAA CGCTTTCGCG
ACCGGCAGAA ACCCGGAAAA TGCAGTGATT GCTGTGACTG AAGGCCTGTG GCGCATTCTC
ACCCCGGATG AAATTCGAGG GGTGCTCGCA CACGAACTGG CTCATGTGAA AAATCGCGAC
ATCCTGGTGA GCTCAATCGC GGCGACCCTG GCCGGTGTGG TCATGATTCT CGCCAGGATG
GCGCAGTGGG GAGCCTTGTT CGGCGGGGGG CGCAGCAGCA GTGACGAAGA CAGCGGCGGA
GGGATGCTCG GGCTGGTGGT TACTGCGATC CTGGCACCCA TTGCGGCCAT GCTGATACAG
CTCGCCATTT CGAGGTCGCG CGAATATCTC GCCGACGAGA CCGGGGCCGC CTTCTCGCAC
AACCCGGAAT CCCTTGCGCG GGCGCTGGAA AAACTGGCCA TGGCCTCGCA CCAGAACCCC
ATGGAGGACG CCAGCCCGTC CACGGCGCAT CTCTTCATCG TGAATCCTCT TTCCGGACGG
TCACTCGCCA ACCTCTTCAG CACTCATCCC CCCATCGAAG AGCGCATACG GCGACTGCGC
TCCATGTGA
|
|---|
| Protein sequence | MGSRFRTTVL LAALTALIIW IGGAVGGSHG MMIAFVLALV MNVGSYWFSD KIVLAMYRAQ
PLSEADAPQI YRIVRELSAS ANLPMPRVYL IPESAPNAFA TGRNPENAVI AVTEGLWRIL
TPDEIRGVLA HELAHVKNRD ILVSSIAATL AGVVMILARM AQWGALFGGG RSSSDEDSGG
GMLGLVVTAI LAPIAAMLIQ LAISRSREYL ADETGAAFSH NPESLARALE KLAMASHQNP
MEDASPSTAH LFIVNPLSGR SLANLFSTHP PIEERIRRLR SM
|
|---|
| |