Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1261 |
Symbol | |
ID | 4460688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1558390 |
End bp | 1559559 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702030 |
Product | DNA repair photolyase-like |
Protein accession | YP_845388 |
Protein GI | 116748701 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.288369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGG TTGCAGGAAA TGAACGGGGA CGGCCCTGCC GTCGACGAAA GAGGTCTGTG TCCGAATCCA TGAAATCCAT GGCCCTCAAG CCGCCCGGAA GAATCGTGAT CGAAGCGGAC GTCGCCCATA GCCCGCTGGT TGAAACCCTG AGACGAAACC TGCCCCACGC CGGGGTGAGC GTCGTGGACC GCGTGCAGGA GAAGGCCGTC CACGATCCGG ATGTGCTGGA AGTGGTCCGG TTCAGGGGCC GGTTCCTCAA ATCCTGCCCC GGAACCCGCC AGTACAACTG CTGCGGGTAT CGCATCCTCC ACTTCGGCCT GCAGTGTTCG CTGGACTGCA CCTACTGCAT CCTGCAGGCC TATCTCAATC AGCCGAACCT GAGGCTTTTC GGGAACACCG ATGATCTCTT CGAGGAGCTC GCGGCGGAAA TCGACACGCA TCCCGGACAG CTCTACCGGA TCGGGACCGG GGAATTCACG GATTCGCTTC TGCTGGACCC GTGGACCGGC TTTTCCCGGC CGACGGTACG GTTTTTTGCC TCGCGCGCCA ACGCCGTCCT CGAGCTGAAG ACGAAAACCG ATTACATTGG AAATCTTCGG GACCTGGATC ATCGTGGACA CACCATCGTG GCGTGGTCCC TCAACGCCGA AAGCGTGCGT TGGCGCGAAG AAACCAAATC GGCCACGCTG CGGCAGCGCT TCGACGCCGC GCGAACCTGC GCCGAGCTTG GATACGCCCT GGCTTTCCAT TTCGACCCGA TGCTCGAATT TCCTCGCTGG AAAGAAGAGT ACGGCGAGAC GCTGGCGCGG TTGTTCGACG CGGTCGACCC GGCGCGCGTC GTGTGGATCA GCCTCGGCGC CTTCCGGTTC ATGCCGGAGC TCAAGTCCTC CATCCGTTCC AGGCATCCCG ACAGCCGCAT CACCTGCGGT GAATTCATCC CGGGGCTCGA CGGAAAGATG CGCTACTTCA GGGACATACG TGTGGAGATG TATTCTTTCA TGGTGGATCG CATCCGGGCG TTCGATCCCG AGCTGTGCAC GTACCTGTGC ATGGAGGGAA ACGACATCTG GCGGGACGCC TTCGGTTTCA CGCCGGCCGA GCGGGGCGGT CTGGGTGCGA TGCTCGACCG GGCCGTGCTC CAGCGGATGA AAGTCGGGGC GACCTTCTGA
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Protein sequence | MSRVAGNERG RPCRRRKRSV SESMKSMALK PPGRIVIEAD VAHSPLVETL RRNLPHAGVS VVDRVQEKAV HDPDVLEVVR FRGRFLKSCP GTRQYNCCGY RILHFGLQCS LDCTYCILQA YLNQPNLRLF GNTDDLFEEL AAEIDTHPGQ LYRIGTGEFT DSLLLDPWTG FSRPTVRFFA SRANAVLELK TKTDYIGNLR DLDHRGHTIV AWSLNAESVR WREETKSATL RQRFDAARTC AELGYALAFH FDPMLEFPRW KEEYGETLAR LFDAVDPARV VWISLGAFRF MPELKSSIRS RHPDSRITCG EFIPGLDGKM RYFRDIRVEM YSFMVDRIRA FDPELCTYLC MEGNDIWRDA FGFTPAERGG LGAMLDRAVL QRMKVGATF
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