| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1257 |
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| Symbol | |
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| ID | 4460684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1552566 |
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| End bp | 1554599 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702026 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_845384 |
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| Protein GI | 116748697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGATC CCAAGTCACC CACCCCGGAT TCCGGCTCAT CTGCGGGTAG ACCCGGATCA
TCCGCAACCG TCCGCGAGCC GCACACTGCC GATCCCGGCT CGCCTCCAAC CGAACCCGGC
TCAGCCGCGT TCGACCCCGG CCCGCTCACA GCCGACGCCC AGGCGCCCGA CGGCGCAGTC
CCTTGCGACG ACTCCCCTTC CCTGCTCTCC AAAACGGCTT CATTCCCGCA TCTGCCCGGA
GTCTACCTGT TCAAGGACGC CTCCGGCGCG GTGCTCTACG TCGGGAAAGC CATCGACCTG
CGCAAGCGCA TCGCCAGCTA CTTCAAGAGC ACCGGTCCGA TCCCCGTGAA GACGCGCGCG
CTCATGGGGA AAGCCGCGGA CATGGAATAC GTCGTCACCT CCAACGAGAA GGAAGCCCTG
CTCCTCGAGG CGAGCCTCAT CAAGAAACAC CGACCGCGTT ACAACGTGGT CCTGCGCGAC
GACAAGAACT ACCCGGCGCT GCGCATCGAC CCCCGCGAAC CTTTCCCGCG ACTCGAAGTG
GTCCGCCGAT TCCAGAGGGA CGGGGCACTC TACTTCGGCC CATACCACTC CGCGTACGCA
CTCCGGGAAA CCCTGCGGCT CCTGCACCAG CTCTTTCCCC TGCGTCTCTG CAAGGGAAAA
CGGCTGCTCG CCCGCGAACG CCCCTGCCTC AACTACTCGC TCGGCCGCTG CCTCGGGGCT
TGTGCCGGGA GAGTTTCCCC GGAAGACTAC CACAAGATGG TGGACGAGGT CGTCCTGTTC
CTGCAGGGCA AAACGGACGT GCTCCAGCAG CAGTTGCGCC GGCGCATGGC CGACGCAGCC
GAAGCCCTGA ACTTCGAGCT TGCCGCCTAC TACCGGGATC GCCTCCAGGG CATTGCTTCC
ATGCTGGAAA AGCAGCACAT CGTCTCCGAC CGATTTCTCA ACCAGGACGT GATCGGCCTT
CATGTCGGGG AAGAAGGCGC CGAACTGGCG ATCCTGTTCG TGCGCAAGGG CACTCTCACC
GGCCAGCGGG ACTTCGATCT CCGGGACGCC CAGGGCGAGC CCATGGAGCT GCTGACCGCC
TTCATTCAGC AATTCTACCG GGAAGACCGT TACATCCCCG ATGAAATCGT GGTACCGGCC
CCCGTCGAGG CCGAAGCGCT CCTGGAGGAG TGGCTCACCG AATTGAAAGG AAAGCGGGTC
CGGGTCTGGG CCGCCAGGCG CGGAGATCGC CGCGAGCTGC TGGAAATCGC CGGGAAGAAC
GCCCGGGAAC GGTACACCAG CCGGCGAAAG TGGCAGAAAC GGGACGTCAC CATGCTCCAG
AACCTGCAGC GCATTCTGAA ACTCCCGCGT GCCCCTCTGC GCATGGCCTG CGTGGACATC
TCGAACATCC AGGGACGGCA CGCGGTCGGT GCCGTGGTGG TGTTCTCCGA AGGCTCCCCG
GATAAGGACT CCTACCGCCG CTACCGCATC CACGGCAAGA CGGAGCCCGA CGATCCCGCA
ATGATGGCGG AAGTGATCGA ACGGCTTCTG AAGAACGATG CACCCCTGGC TGAAAGCCTG
GATCTGCTCG TGCTCGACGG CGGCAAGAGC CAGCTCAACC GGATTCGCCG ACTCATGGAG
GAACTGGGAG CCGCCGAGGG ACTTCCGCTC ATTTCCATCG CCAAGGAGAA AGAAACCGAC
CGCGGCGAGA AGGGCCGCGG CCTCTACGAA AAGATATACC TCCCGGGACG CAAGAACCCA
TTATTTCTCC ACCACTATCC GGACATTCTG CACCTCTTGC AGCGGCTGCG CGACGAGGCT
CACCGCTTTG CCATATCCCA TTACAAGAGC CTCCATCGAA ACGATCTCCT GGCCTCCGCC
CTGGATGCCG TTCCCGGAGT GGGTCCGAAG CGGAGCCGGC TGCTCATTCG CCATTTCGGC
AGCATGAAAG CCCTGCGGGA GGCGAGCGTG GAGGATATCG CGCAGGTGCC GGGGGTCCCT
CCGACCGTCG CTCGAACCAT TTTCAACATT CTGCGGAGCA GCGGCGAGGA ATAG
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| Protein sequence | MGDPKSPTPD SGSSAGRPGS SATVREPHTA DPGSPPTEPG SAAFDPGPLT ADAQAPDGAV
PCDDSPSLLS KTASFPHLPG VYLFKDASGA VLYVGKAIDL RKRIASYFKS TGPIPVKTRA
LMGKAADMEY VVTSNEKEAL LLEASLIKKH RPRYNVVLRD DKNYPALRID PREPFPRLEV
VRRFQRDGAL YFGPYHSAYA LRETLRLLHQ LFPLRLCKGK RLLARERPCL NYSLGRCLGA
CAGRVSPEDY HKMVDEVVLF LQGKTDVLQQ QLRRRMADAA EALNFELAAY YRDRLQGIAS
MLEKQHIVSD RFLNQDVIGL HVGEEGAELA ILFVRKGTLT GQRDFDLRDA QGEPMELLTA
FIQQFYREDR YIPDEIVVPA PVEAEALLEE WLTELKGKRV RVWAARRGDR RELLEIAGKN
ARERYTSRRK WQKRDVTMLQ NLQRILKLPR APLRMACVDI SNIQGRHAVG AVVVFSEGSP
DKDSYRRYRI HGKTEPDDPA MMAEVIERLL KNDAPLAESL DLLVLDGGKS QLNRIRRLME
ELGAAEGLPL ISIAKEKETD RGEKGRGLYE KIYLPGRKNP LFLHHYPDIL HLLQRLRDEA
HRFAISHYKS LHRNDLLASA LDAVPGVGPK RSRLLIRHFG SMKALREASV EDIAQVPGVP
PTVARTIFNI LRSSGEE
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