Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1240 |
Symbol | |
ID | 4461365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1535655 |
End bp | 1535999 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639702008 |
Product | preprotein translocase, YajC subunit |
Protein accession | YP_845367 |
Protein GI | 116748680 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.659198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTGA CCGGTATTGC TTATGCAATG GGCACGACTG GCCAGGGCGG CGCCGCGGAA GGCGCAGGCG GCGGTCTGGC GGCTTTCGCA CCATTGATCA TCATGGTCGC GATTTTCTAC TTTCTCCTGA TCAGGCCTCA GCAAAAGAAA CAGAAAGAAC ACCGGGCCAT GCTGGGCAAC CTGAAAAAGG ACGACGTCGT CCTCACGCAA GGAGGACTGC AGGGCAAGAT CACCGGTTTG ACCGACACGG TGGCGACTAT CGAAATTGCC GACAAGGTTC GAGTCAAGGT GCACAGAGGA TACATCGCGG CCTTGATTTC CAAGGGTGAG ACTCCCGCCG AATAG
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Protein sequence | MDLTGIAYAM GTTGQGGAAE GAGGGLAAFA PLIIMVAIFY FLLIRPQQKK QKEHRAMLGN LKKDDVVLTQ GGLQGKITGL TDTVATIEIA DKVRVKVHRG YIAALISKGE TPAE
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