| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1227 |
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| Symbol | nusA |
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| ID | 4460998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1518907 |
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| End bp | 1520256 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639701995 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_845354 |
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| Protein GI | 116748667 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000158035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGTG AACTTAAGCG GTTGATCGAC CAGGTGAGCC GCGAGAAGGG AATCGACCGC
CAGACGTTGA TCCATACGCT CGAGGAGGCC ATCAAATCGG CTATCAAGAA GAAGTATGGG
ACGAGACAGG ACCTGGACGT CACCTACAAC GAAGAATACG GTGAGCTCGA GGCCTTTCAG
TTCAAGGAAG TGGTCGAGAC CGTGACCGAT CCGGACAAAC AAGTTTCCCT GGCGGAAGCG
ATCAAGCTTG ATCCCGAAAG CGAAATTGGG GACGAGCTTG GTATCCGGAT GGATACCGAG
ACACTGGGCC GTATTGCCGC GCAATCCGCC AAGCAGGTCA TCATTCAGAA GATGAAAGAC
GCCGAGCGCG AAGTCGTCTA CGAGGAATTC AAGAGTCGCA AGGGAGAGAT CGCACACGGA
GTCGTCCAGC GCGTGGACAA GAGCGGCATC GTGGTGAACA TGGGACAGGC GGAAGCCATT
CTCCCGCCCA AGGAGCAGAT TCCAAGGGAA GTCTTTCGCC AGGGAGACCG GGTCAGGGCT
TACGTGCTGG ACGTGAAGAA GATCAGCAAG GGACCTCAGA TCGTCCTGAG CCGGACTCAT
CCTCACTTTC TGATTCAATT GTTTCACGGC GAGGTGCCTG AGATTGTGGA AGGCATCGTG
AGCATCATCA GCGCGGCCCG GGAACCGGGC TCGCGCGCCA AGATCGCCGT GATTTCCAAA
GCCACGGACG TGGATCCCGT GGGCGCTTGC GTGGGCATGA AGGGAACGCG CGTGCAGAAC
GTCGTTCAGG AACTGCGGGG GGAAAAGATC GATATCGTGC CCTGGAACAT GGACCCGGCG
AAGTTCGTGG TGAACGCGCT GGCCCCGGCG ATCATTTCGA AGGTCATCAT CGATCAGGCC
AACCGCAGCA TGGAAGTCAT CGTACCCGAC GATCAACTGT CGTTGGCCAT CGGCAAGAAA
GGGCAAAACG TCCGCCTGGC ATCGCGCCTC ACCAACTGGC GGATAGACGT TAAGAACGAA
AGCCGGCACG AACGTCAGAA GCAGACCGGA TACCAATCCA TGCTGCGCAT CAATGGTCTG
ACGGCACAAC TTGCCGACCG GCTCTACGAA GCGGGGATCA CTTCACTCCA GGAATTCATC
GATGCAAGCG GCTCGGAGCT GGAGGAACTC ACCCAATTGG CAGGACCCGT CATCGAGGAG
ATGAAGGCCG AGGCGGGACG ATTGGTACTG GAAAATGAAA CGACGGCGGA AGCCGCTTCC
GAGGGAAACG AAACGCAACA GGACGGGGAG GCTTCCGAGT CCCCGGAGTC CTTGGTCGAG
GTTTCCGAGG AACAGGTTCA GGGGGAGTAA
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| Protein sequence | MASELKRLID QVSREKGIDR QTLIHTLEEA IKSAIKKKYG TRQDLDVTYN EEYGELEAFQ
FKEVVETVTD PDKQVSLAEA IKLDPESEIG DELGIRMDTE TLGRIAAQSA KQVIIQKMKD
AEREVVYEEF KSRKGEIAHG VVQRVDKSGI VVNMGQAEAI LPPKEQIPRE VFRQGDRVRA
YVLDVKKISK GPQIVLSRTH PHFLIQLFHG EVPEIVEGIV SIISAAREPG SRAKIAVISK
ATDVDPVGAC VGMKGTRVQN VVQELRGEKI DIVPWNMDPA KFVVNALAPA IISKVIIDQA
NRSMEVIVPD DQLSLAIGKK GQNVRLASRL TNWRIDVKNE SRHERQKQTG YQSMLRINGL
TAQLADRLYE AGITSLQEFI DASGSELEEL TQLAGPVIEE MKAEAGRLVL ENETTAEAAS
EGNETQQDGE ASESPESLVE VSEEQVQGE
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