| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1226 |
|---|
| Symbol | |
|---|
| ID | 4460997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1518329 |
|---|
| End bp | 1518835 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639701994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_845353 |
|---|
| Protein GI | 116748666 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00744714 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA GTGATCCCGC GCCCGGTGGT GAGGAAAAGG TCGACCGTAT CGTCAGGCAG
GTATGGGACC TGACGGAACC CGTGATTCGG GCGGAAGGGA TGGAGATCAT CGAAATTGAA
TACCGACGGG AATCTCCCGG CTGGGTGTTG CGCGTGTTCG TGGACCAGGA AGGCGGAGTG
TCCGTGGATG ATTGCGCCAG AATCAGCCGC GTCGTGGGGG ACCTCCTTGA TGTGGCTGAT
ATCATTCACT ATCCTTACCA TTTGGAAGTC TCCTCGCCGG GGCTGAACAG GCCATTGCGC
AAGAGGGAAC AATTTGCCAA GGTCGTCGGT AAGGTGATTG AAGTCAAAAC TTTGGTTCCA
TTTGGGACGC GCCGCAATTT CAAGGGGATT CTCAAGGAAG TCGGCGTCGA ACGGATCAGG
ATGGATTGCG ACAACCAGTT GTTCGAAATC CCTTTCTCGA ACATGGACCG CGCGCGCTTG
CGCTATTTCG ATTCTCAAGA GGATTAG
|
|---|
| Protein sequence | MKKSDPAPGG EEKVDRIVRQ VWDLTEPVIR AEGMEIIEIE YRRESPGWVL RVFVDQEGGV
SVDDCARISR VVGDLLDVAD IIHYPYHLEV SSPGLNRPLR KREQFAKVVG KVIEVKTLVP
FGTRRNFKGI LKEVGVERIR MDCDNQLFEI PFSNMDRARL RYFDSQED
|
|---|
| |