| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1213 |
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| Symbol | |
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| ID | 4460638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1499505 |
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| End bp | 1501310 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701980 |
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| Product | DNA primase |
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| Protein accession | YP_845340 |
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| Protein GI | 116748653 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.140428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTC TTGTGAAGCA GGCCGTTGAC ATTGTCGACG TGGTCGGACA GGTCGTCCAG
CTGCGGCGCT CGGGCAACAG GCACCTGGGA CTGTGCCCGT TTCATCAGGA GAAGACCCCA
TCGTTCCATG TCGATGCCGA AAACCAGCTT TACTACTGCT TCGGGTGCGG CAGCGGAGGG
GACGTCCTCA ACTTCGTGAT GAAGCACAGG AACGTAGCGT TCGGGGAAGC CATCCGGTAT
CTGGCGGAAA GATATCACAT CGCCCTCCCG GAACGCGACC ATGTTGAAGG CGCCACGCCG
GGCGCGATTG AGAGTGCCCG GAAGGAACGC GAAGAGCTCT ACCGGATCCT CCGCTCGGCG
GCGGATTTTT TTTATGACCA GCTGCATCAC AGCCCGGAGG GAAGGATCGC GAGGGAATAT
ATTGCGCGGC GCGGCCTGCC GGCGGAGGTC GTCGAAACGG AGCGGATGGG ATTTGCTCCA
CAGAGCTGGG ACAGCCTGTC CCGTCACCTG GCGAATCTCG GATATGATGT CGAACCGGGG
ATCGGGGCGG GGCTGCTGGC CCGGAGCACC GGTAAGGACA GAGTCTATGA CCGGTTTCGC
AACCGTCTCA TATTTCCCAT CCGGGACGAG GGAGGCCGGA TCGTGGCTTT CGGCGGTCGA
AGCCTCTCCG CGGACCTCAA GGACGAGCCG AAGTACCTCA ACAGCCCCGA AACCGCCGTG
TACCACAAGG GACGGTTGCT CTACCAACTG GCGAGAGCCC GCGAAGCATG CAGGCAGGTG
CGGCAGACGG TCCTGGTGGA AGGCTACATG GACTTGCTGG CGTTCCACGC GCGAGGGTTC
TTCCGCGTGG TCGCGACCCT GGGAACGGCC CTTACGCCTC ACCAGGTTCG GATATTGTCC
CGGATGTCCG ACGAAGTCGT TATGGCCTAT GACGGAGACG AGGCGGGAGA CAAAGCGATG
CTGAGAGGGC TGCCGCTTTT TCTGCAGGAG AACGTGGCGG TCAGTTGCGT GCGCTTTCCC
GACGGTATGG ACCCCGACGA TTTCCTCAGG AGGGACGGGC TGGAAGGTTT CGAGAAACTG
CTCCGAAGCA GGCAGGAACT GGGCGCTTAC GCCGTCAAGA GAATCCTTGA CGGCTGGGAT
GGAAGCGCAA GCGCGAGGCT GAAAATCGCT GCCGAATTGA GGCCGATTTT CGACGCCGTG
CGCCAACCCC TGCTGAAGTC CGAGTATCTG AGGCTGGCGG CCGACCGGCT CTGCGTCTCC
GAAGAAGTGT TGAATCAGCA GTTGCGCCAC GACCGCCGCA CGCCGGAAAG ACCTTACTCC
CGCTCCTACC GTACCCCCGT TCTTCCCGGA ATCTCCGAAA CGCAGACCCT CGAGGAAAAA
ATCCTTCGAT TGCTCATCAG ATACCCCGAT CTCATCGAGC AAGCCGACAG CTCGGGCGCG
CTGGAGTACT TCCAAGAACC GAAACTGCGT GCCCTGGCGA TGGTGCTCGT TGGAACACCT
CACGCTCCGG AGAGCGAATT CAATGCCTCC ATCGTCTACG ACGAGCTTGC CGATCCGGAA
TCCAAGGAGA TGTTCACACG GTTCATGCTT GAATCCGCGG AACTTGCGGA ACCGAGGGTG
CAGCTTAACG ACTGGTTGAT CGCGCTGACG AGACGGGAGC TCAAACAGAG AAGCCTGGAC
CTGGACACCG CCCTTAAGGC GGCCGTCCGG GAAGGCGACT CGGATCGGGT CAGACACATC
CTGGTGGAGA TTCAGAACCT GAACTCCGCC AAGAAGAGGG ATAAAGATTT ACCGTACAAC
CTGTAG
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| Protein sequence | MATLVKQAVD IVDVVGQVVQ LRRSGNRHLG LCPFHQEKTP SFHVDAENQL YYCFGCGSGG
DVLNFVMKHR NVAFGEAIRY LAERYHIALP ERDHVEGATP GAIESARKER EELYRILRSA
ADFFYDQLHH SPEGRIAREY IARRGLPAEV VETERMGFAP QSWDSLSRHL ANLGYDVEPG
IGAGLLARST GKDRVYDRFR NRLIFPIRDE GGRIVAFGGR SLSADLKDEP KYLNSPETAV
YHKGRLLYQL ARAREACRQV RQTVLVEGYM DLLAFHARGF FRVVATLGTA LTPHQVRILS
RMSDEVVMAY DGDEAGDKAM LRGLPLFLQE NVAVSCVRFP DGMDPDDFLR RDGLEGFEKL
LRSRQELGAY AVKRILDGWD GSASARLKIA AELRPIFDAV RQPLLKSEYL RLAADRLCVS
EEVLNQQLRH DRRTPERPYS RSYRTPVLPG ISETQTLEEK ILRLLIRYPD LIEQADSSGA
LEYFQEPKLR ALAMVLVGTP HAPESEFNAS IVYDELADPE SKEMFTRFML ESAELAEPRV
QLNDWLIALT RRELKQRSLD LDTALKAAVR EGDSDRVRHI LVEIQNLNSA KKRDKDLPYN
L
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