Gene Sfum_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1201 
Symbol 
ID4460473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1485942 
End bp1487129 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID639701968 
Productarginine biosynthesis bifunctional protein ArgJ 
Protein accessionYP_845329 
Protein GI116748642 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0395659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGCT TCAAAACAGC GGCGGCCGCG TGCGGGATGC GCTACCGGGG CCGTCCCGAT 
CTGGCTTTGA TCATGGTGGA TTCCGAGGCG GGGGGAACAG CCGCCGGCGT CTTCACCACC
AACCGGTTCA CCGCCGCTCC GGTGGAGCTG TGCAAGAACC ACCTGGAATC CCCCTCCATT
CGGGCCATCC TCATCAACGC CGGGATTGCC AACGCCTGCA CGGGAGAAGA AGGGTACCGA
AGAGCCCTGG AGATGGCGCG CGCGGCCGGT GAAGCCATGA AAGCCCCCGC AGGTTCGGTG
CTCGTCGCAT CGACCGGCGT GATCGGAATG CAGGTGGATC CGGAGCCCGT GCGCCGGGAA
ATGCGCGGGC TGGTGGAATC CGCGCGCCCG GACAGGTGGG ATGAGGTGGC CCGGGCCATC
ATGACCACCG ACACGGTGCC CAAGATGTCG AGCGCCACGG TGGAAATCGG CGGACGGCGG
GTCACCGTCG GCGGCGTGGC CAAGGGTTCC GGAATGATCG CCCCGAACAT GGCCACCCTG
TTGGCATTCG TATGCACCGA TGCCGCGGTG GAACGACGGG TCCTGGACCA CTGGCTGCGG
TCCGGGGCGG AACGGTCTTT CAACTGCATC ACCGTCGACG GGGACACCAG CACGAACGAT
TCGCTGATCG CCCTGGCGAG CGGAGCGGCG GGAAACCCCG TGCTGGCCGA CGTTGCCGGC
CCCGAGAGTG TCCTTTTCGG GCAGGCGCTG GAAGCAGTGC TCGTCGATCT GGCCAAAAAG
GTCGTGATCG ACGGGGAGGG CGCCACAAAG TTCATCGAAA TCGAGATCGT GGGTGCCCCG
GACGAACGAA GCGCCAAAAC GGTGGCTTTG ACCGTCGCCA ATTCGCCACT GGTGAAGACC
GCCTTTTTCG GTGAGGATGC CAACTGGGGC AGAATCGTCT GCGCCGCCGG AAGAGCCGGT
GTCGATTTGA ACCCGGATCG GGTGGCGCTG TACTTTGACG GGCTGTGCGT GTTTCGAGAG
GGGACCCCGG TGCCCGGCGC GGAGGTGGAG GAACGCGCGG CGTCGGCTTT CCGCCGGAAG
GACATCAAGG TTCGCCTGGA TCTCGGCATG GGGACCGCAT CCTTTGTCGC CTACACCTGC
GATTTCTCCT ACGATTATGT AAAGATCAAC GCCTCCTACA GGTCGTGA
 
Protein sequence
MQGFKTAAAA CGMRYRGRPD LALIMVDSEA GGTAAGVFTT NRFTAAPVEL CKNHLESPSI 
RAILINAGIA NACTGEEGYR RALEMARAAG EAMKAPAGSV LVASTGVIGM QVDPEPVRRE
MRGLVESARP DRWDEVARAI MTTDTVPKMS SATVEIGGRR VTVGGVAKGS GMIAPNMATL
LAFVCTDAAV ERRVLDHWLR SGAERSFNCI TVDGDTSTND SLIALASGAA GNPVLADVAG
PESVLFGQAL EAVLVDLAKK VVIDGEGATK FIEIEIVGAP DERSAKTVAL TVANSPLVKT
AFFGEDANWG RIVCAAGRAG VDLNPDRVAL YFDGLCVFRE GTPVPGAEVE ERAASAFRRK
DIKVRLDLGM GTASFVAYTC DFSYDYVKIN ASYRS