Gene Sfum_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1179 
Symbol 
ID4461560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1459733 
End bp1461406 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content63% 
IMG OID639701946 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845307 
Protein GI116748620 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.6315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGAAG AAATTCGGAT TGGAGTTTTC GTTTGCGATT GCGGCAGCAA CATCGCCGGT 
TACCTGAACG TCAAGGAACT GGCTGAATAC GCCAGGACGC TGCCCAATGT GGTCTACGTC
AAGGAAAACC TCTACACCTG TTCCGAAGGC GGCATCAACG AGATCAAGGC CGCCATAGGC
CAGGAGAAGC TGAACCGCGT GGTGGTCGCG TCGTGCACCC CGCGGACGCA CGAACCGCTC
TTTCGGGGCA CTTGCGCGGA AGCGGGCCTC AACCCTTACC TGTTCGAGAT GGTCAATATC
CGCGACCAGT GCTCCTGGGT GCACATGCAG GAGCGCGAAG AGGGCACCGC CAAGGCCAGG
GACCTCATCC GCATGGGCGT GGCCAAGGCC GCGCTGCTCG AACCGCAGGT TCCCATCGAA
TCGGCCATGG ACCCCAACGC CATGGTGATC GGCGGCGGGA TCGCGGGTAT GACGGCGGCC
CTCGCCCTGG CCAATCGCGG ATACCAGGTC TACCTGGTGG AAAAGACCGA CCAACTCGGG
GGCATGCTCC TCGCCCTGGA CAAACTTGCC CCGGCCGGAA TAGAAGCCTC GACGCTCGCC
GAACGGCAGG CGGACCTCGT CCGCAGGAAT CACAACATCA AGTTGATGAT GCCTGCCACC
GTGACGGAGG TGTCGGGCTA CATCGGGCAC TTCGGCGTGA CGGTGGATCG CGGCGGCGCA
ACCGACGGGT TCGGCGTCGG CGTCATCATC GTGGCCGTCG GCGCCCAGGT GCTCAGACCC
GTCGGGCTGT TCGGCTACGA CGGAGAGAAG GTCGTCACCC AGCTGGAATT CGAGTCTCTG
CTCAAGGCGA ACGCATTCCA CGCGAAAAGC GTGGTGATGA TCCAGTGCGC CGGCGCGCGC
AACGAGGAAC GCAAATACTG TTCGCGGATC TGTTGCATGG TGGCCATCAA AAACGCCATC
GAAATCAAGG AACGCAGCCC CGGCACCGCG GTGCGCATCC TCTACCGCGA CATCCAGGCC
TACGGGACGG AGAATGAAGC CATGTACGCG CACGCGAAGG AGCTGGGCGT GCTGTTCATC
AAGTACAATC CCGAAAGGCC ACCTGTGGTG GAGGAAGGCC GGGTGAAGGT CTTCCACCAC
TTGCTCGGCC GCGAGCTCGA GTTCTCAGCC GACTTGGTGG TGCTCTCGAC GCCCCTGATC
GCCGGAGAGG ACAACGAGGC CATCTCCAAG CTGCTCCGCG TATCGGTTGA CGAGAATAAA
TTTTTCCTCG AAGGGCACGT GAAGCTCAAA CCGCTCGACT TCGCCACCGA CGGTGTCTAC
CTCTGCGGCA ACGCGCACTA CCCGGCCACG GTGCGGGAAG CCATTTCCCA GGCGCTCGGC
GCGGCGTCGC GAGCGTCCAT CCCGCTGGCC AAAGGAGTGA TGACCGTCGA ACCCATCGTG
TCGACTCTTG CGGACGAGGA CGCGTGCCGC GGCTGCGGGC TGTGCGTGGC CCTGTGCCCA
TACGGAGCGC TCGAGATCGT GCGCACCGAG AAGGGCCGCA AGGTCAAGGT CATTCCCGTG
GCCTGCAAGG GCTGCGGCGT TTGCGCCGCA ACGTGTTACC AGCACGCGTT GACCGTGAAT
TCGTACACGG ACAGGCAAAT CGGGGAGCAG ATCAAGGCTT TCCTGGAAAA ATAG
 
Protein sequence
MAEEIRIGVF VCDCGSNIAG YLNVKELAEY ARTLPNVVYV KENLYTCSEG GINEIKAAIG 
QEKLNRVVVA SCTPRTHEPL FRGTCAEAGL NPYLFEMVNI RDQCSWVHMQ EREEGTAKAR
DLIRMGVAKA ALLEPQVPIE SAMDPNAMVI GGGIAGMTAA LALANRGYQV YLVEKTDQLG
GMLLALDKLA PAGIEASTLA ERQADLVRRN HNIKLMMPAT VTEVSGYIGH FGVTVDRGGA
TDGFGVGVII VAVGAQVLRP VGLFGYDGEK VVTQLEFESL LKANAFHAKS VVMIQCAGAR
NEERKYCSRI CCMVAIKNAI EIKERSPGTA VRILYRDIQA YGTENEAMYA HAKELGVLFI
KYNPERPPVV EEGRVKVFHH LLGRELEFSA DLVVLSTPLI AGEDNEAISK LLRVSVDENK
FFLEGHVKLK PLDFATDGVY LCGNAHYPAT VREAISQALG AASRASIPLA KGVMTVEPIV
STLADEDACR GCGLCVALCP YGALEIVRTE KGRKVKVIPV ACKGCGVCAA TCYQHALTVN
SYTDRQIGEQ IKAFLEK