Gene Sfum_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1151 
Symbol 
ID4460229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1427976 
End bp1428524 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID639701918 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_845279 
Protein GI116748592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0745121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.85361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAACCA ACTGCTTCGT TTTGCTCGCA TGCATCGCCT TCATGATGTC CGGCTGCGCT 
TCCCTTATGC CCGGAGAATC TTCCAAGGAC GCTAACAAGT CCCTGGCACC CACCGCCGGC
GGTTACATCG AGCGGCAGGA AGCCGAGCTG GTGCAGCGAA TGACGCGTGC CGACGGTACG
AGCATCCAAA GGGAGCAGGA CAAGCTGTGC ATCACCTTCA ATTGCGGCGT CCTTTTCCCT
GACGATTCAA CGGAACTGAA ACCGGATGCG CCCGCTCGAA TCGCTCCCGT GGCCGAGGTT
CTCGCGAAAT ATCCCGCAAC ATCCATCAAG GTGGACGGAT TCACGGACCG CACCGGTTCC
GAAAAATACG ACCACGAGAT CACCGAATCC CGGGCCACGG CGGTGAGGGA CGTTCTTGTC
GGCAAAGGCA TCGATCCCGC CCGGATCAGG GCGCGCGGTT TCGGGGATTC CAAGCCGCTC
ACCACCAATG CTACCGATGA AGGCCGACGA ACCAACCGGC GGGTCACCAT CACCATAGCG
CCGCTCTAG
 
Protein sequence
MRTNCFVLLA CIAFMMSGCA SLMPGESSKD ANKSLAPTAG GYIERQEAEL VQRMTRADGT 
SIQREQDKLC ITFNCGVLFP DDSTELKPDA PARIAPVAEV LAKYPATSIK VDGFTDRTGS
EKYDHEITES RATAVRDVLV GKGIDPARIR ARGFGDSKPL TTNATDEGRR TNRRVTITIA
PL