Gene Sfum_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1149 
Symbol 
ID4460227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1425316 
End bp1426098 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID639701916 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845277 
Protein GI116748590 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0610692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.899085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCA ACAGAAGGAA CTTTCTGAAA ATCGGCGGTG TTTGTGCTCT GGGGCTGGGA 
AGCCTGCCGA TTGTCAAAGC GCTCGCCCAG GAAAAGGGGC CCGCATTTTC CTCTGATCCC
CGGCGTTTGG TCGCAAAAAG ATGGGCCATG GTCGTGGATA TGAAGAAATG CTGGGAGATG
GGCAAACCGG GCTGCAAGGA CTGCGTGCTT GCCTGCCACA CGGTGCACAA TGTCCCCGAT
ATCAAGGACG AGCAGGAAGA AATCAAGTGG ATTTGGCCCG AGCAGTTCAA CCACGCCTTC
ACCGGCCAGG AAAACGAATT CATCCCGGCT GAAATGAAGG AAAAGCCCTT CCTGATGCTT
TGCAACCACT GCGCCAATCC CCCTTGTGTG AGGGTCTGCC CCACCAAGGC CACCTTCAAG
TCCCCGGACG GGATCACCAT GATGGACTTT CACCGGTGCA TCGGCTGCCG CTACTGCATG
GCCGGCTGCC CGTATGGGGC CAGAAGTTTC AACTGGCAGG ATCCGCGTCC GCACATCCAG
ACGGAGCTCA ACATGAGTTT CCCGACCAGA GAACGCGGCG TGGTCGAGAA GTGCAATTTC
TGCACGGAAC GACTCGAAGT CGGCCTGCTT CCGGCTTGTG TCGAAGCCTG CAAAGTTGGA
GGCTTGATCT TCGGGGACGT CGAGGACCCG AATTCCAACG TGCGGAAGGT TCTCGCGGAG
CGATTCACCA TGAGGCGGAA ACCCGAACTC GGGACTCAGC CCAACGTTTA TTACATAGTA
TGA
 
Protein sequence
MESNRRNFLK IGGVCALGLG SLPIVKALAQ EKGPAFSSDP RRLVAKRWAM VVDMKKCWEM 
GKPGCKDCVL ACHTVHNVPD IKDEQEEIKW IWPEQFNHAF TGQENEFIPA EMKEKPFLML
CNHCANPPCV RVCPTKATFK SPDGITMMDF HRCIGCRYCM AGCPYGARSF NWQDPRPHIQ
TELNMSFPTR ERGVVEKCNF CTERLEVGLL PACVEACKVG GLIFGDVEDP NSNVRKVLAE
RFTMRRKPEL GTQPNVYYIV