Gene Sfum_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1146 
Symbol 
ID4460224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1422296 
End bp1423288 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content56% 
IMG OID639701913 
Productnitrate reductase, gamma subunit 
Protein accessionYP_845274 
Protein GI116748587 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.247321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA AATTTTCTTT ACTCTTAGTG ATAGCGCTCG TTTTGGCTGT ATTCCTGGGA 
GTGAAGGCGG CTGGCTTGTA CTATGTTTTC GGGGTCATTG TCCCGTACGT AGCCATCCTC
TTTTTCCTGG GCGGGGTGAT CTTCAAGGTC CTGAAATGGG CGAGCACCCC GGTCCCCTTC
CGCATTCCCA CCACAGGGGG GCAGCAGAAG TCCTTGCCGT GGATCAAACA AAACAAGCTC
GACAACCCGA CGACCGTCGC CCAGACGGTG GGCAGGATGG CACTCGAGGT GCTTTTGTTC
CGCTCTCTTT TCCGCAACAC CAAGTTCGAG TTCAAGGAGG GCCCCAAGCT CGTCTACCAG
TGGGAAAAGT GGCTCTGGCT GGCCGGGCTG GCTTTCCATT ACTCGTTCCT CCTGATCCTT
GTCAGGCACC TGCGCTTTTT CGCCGAGCCG GTGCCGGGCT TCGTGCATTT GACGGAAAGG
ATGGACGGCA TCCTGCAACT GGGGCTTCCC GGCGTCTACA TCACCGACAT GCTGTTTGTA
GTCGCCGTGA CCTACCTCTT CATCCGCCGG GTCGTGATTC CCCAGGTGCG TTATATCTCG
CTTGCCGCCG ACTATTTTCC GCTTTTTCTC CTCCTGGCGG TGGGCGTCAC GGGCATCCTG
ATGCGCTACT TCCTCAAGCT GGACTTGCTC AAGGTCAAGG AACTGACGAT GAACCTGGTC
ACTTTCCGTC CGGCTGTGCC GGAAGGAATC GGCGTGCTCT TCTACATCCA CTTCTTCCTG
GTCTGCACGC TGATTGCCTA TTTCCCCTTC AGCAAGCTGA TGCACCTGGG CGGCGTATTT
CTCAGCCCCA CGAGGAACCT GCCCAATGAC AGCCGCATCA AGAGGCACAT CAATCCGTGG
AACTATCCCG TAAAGGTCCA TACCTACGCC GAATACGAGG ATCATTTCAG GGATAAGATG
ATAGAGGCCG GCCTACCAGT GGAAAAGGAG TAA
 
Protein sequence
MGMKFSLLLV IALVLAVFLG VKAAGLYYVF GVIVPYVAIL FFLGGVIFKV LKWASTPVPF 
RIPTTGGQQK SLPWIKQNKL DNPTTVAQTV GRMALEVLLF RSLFRNTKFE FKEGPKLVYQ
WEKWLWLAGL AFHYSFLLIL VRHLRFFAEP VPGFVHLTER MDGILQLGLP GVYITDMLFV
VAVTYLFIRR VVIPQVRYIS LAADYFPLFL LLAVGVTGIL MRYFLKLDLL KVKELTMNLV
TFRPAVPEGI GVLFYIHFFL VCTLIAYFPF SKLMHLGGVF LSPTRNLPND SRIKRHINPW
NYPVKVHTYA EYEDHFRDKM IEAGLPVEKE