| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1119 |
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| Symbol | |
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| ID | 4457945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1390672 |
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| End bp | 1393419 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639701886 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_845247 |
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| Protein GI | 116748560 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0880814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGGC TGATGGCAAA GCACTGGCAC CACATGCCGG GAGGGGAAGC GAGCGAGCTC
CTTCAAACCA ACCCGGAGAG GGGCCTGGAA GAATTCGAAG CCAAACGCCG CCAGGAACAC
TTCGGACCCA ACGTCATCAC CGGCAAAGGG GGAAAAGGCC CCCTCATGCG ATTCCTCCTG
CAGCTTCATC AGCCCCTCAT CTATATCCTG ATCGCAGCCG GAGCGGTGAC GGCCGCCTTC
CGGGAATGGG TCGACTCGGG CGTCATTTTC GGGGTGGTGC TGGTCAACGC CTCTATCGGT
TTCCTCCAGG AGTCCAAGGC CTTGGCCGCC ATCGCCGCCC TCGCCCAGAC CATGGTGGCC
GAAGTCACGG TGCTGAGAGG CGGCTCCAGG CGCCGGATCT CCTCCGCGGA GGTGGTGCCG
GGCGACCTCA TCCTCCTTCA GTCGGGCGAC AAGGTCCCCG CCGACATGCG CCTGATCGAA
TTGAAGGATC TGCAGATCGA TGAATCCACC CTTACCGGCG AATCGGTACC GGTCAAGAAG
AAAAGAGGGG TTCTCGACCG TGACACCGTG CTGGCCGATC GCCGCAACAT GGTCTACGCC
TCGACCCTGG TCACTTACGG CCAGGGAACC GGGGTGGTGG TCGCCACGGG CAACGCCACG
GAAGTCGGGC GGATCTCCGA GCTCATTTCC GCGGCACCCG AGCTGCAGAC CCCGCTCACA
AAAAAGATCG CCCACTTCAG CCACATTCTG CTTTACGCCA TCCTGGCGCT TGCCGCGGCC
ACGGTGCTGA TCGGCGTTCT TCGAGGCCAA CCCGCTCTCG AGATGTTCAT GGCGGCAGTC
GCGCTGGCCG TGGGAGCCAT CCCGGAAGGG CTTCCCGCGG CGTTGAGCAT CACGCTCGCC
ATCGGCGTCG CGCGGATGGC CAGGCGACGG GCGGTCATCC GCCGCCTTCC CGCCGTGGAG
ACCCTGGGCA GCACCACCGT CATCTGCACG GACAAAACAG GGACTTTGAC CGAGAACCAG
ATGACCGTTC AGGAAATCTT CGCCGGCGAC GAAACCTTCG AAGTGTCGGG CGCGGGTTAC
GACCCCTCGG GAACGGTCCT GAAGCAGGGC GAGCCCATCA CCCACGGTGG AACCCCGGTA
CTGTTTGAGT GTTTGCGGGC GGGATTGCTC TGCAACGACA GCATCCTCGT GCAAAAGGAA
GGCCGCTGGG GCGTGCAGGG AGATCCCACG GAAGGTGCCC TGATCGTCGT CGCCGCCAAG
GTGGGCCTCT CGGCCGACGA AGAGGCGGCC CGGCTTCCGC GGCTCGACGT GATTCCCTTC
GAATCGGAAC GCCAGTACAT GGCGACCTTG CATGATGCGG GGCAGGCCGA AACCCCGATC
GCCTACGTCA AGGGGGCGGC CGAGATCATC CTGGAGCGGT GCACGGAATC TCTCGACGCG
ACAGGAGCCG CTCAACCGGT GGACAGGGAA CGGGTGATGG CCGAGGTCGG GAGGATGGCT
TCAAACGGTT TGCGCGTCCT GGCGTTTGCG AAAAAGGACA TCTCCCCGGA ATCGGCCCCG
TTCGACCATG AGGACGTGGC CGGCGGCCTC CGTTTCCTGG GGCTGCAGGG GATGATCGAC
CCGCCGCGGG CTGAGGCGAT AGAGGCCGTG AAAGCGTGTC ACACGGCAGG CATCCGCATC
AAGATGATCA CCGGAGACCA TGCGATCACC GCGTCGGCGA TCGCCGAAAA GATCGGGCTG
ATCGATGCCG GGGATTCTGC CCCGGCCGGG AAGGCGGCGA TAACCGGGAA AACCCTGGCG
AAAATGCCGG ACGCGGAGCT CATCGAGGCG GCTGAAGAGA CACCGGTTTT CGCCAGGGTG
GACCCCGAGC AGAAGCTGTC GCTCGTCGAA GCGCTCCAGG CAAGGGGGCA CATCGTCGCC
ATGACCGGCG ACGGCGTGAA CGACGCGCCG GCGTTGAAGC GGGCCAACAT CGGCATCGCC
ATGGGCATCA CCGGTACCGA GGTGGCCAAG GAAGCCGCCG ATATGATCCT CACCGACGAC
AACTTCGCCA CCATCGAAGC CGCGGTTGAG GAAGGGCGGG GAGTCTTCGA CAACCTCACC
AAATTCATCG TCTGGACGCT CCCCACGAAC CTGGGTGAAG GTCTCGTGAT TCTTTTGGCC
ATCTTTGCCG GCGCGACGCT GCCGATCCTC CCCGTCCAGA TCCTGTGGAT CAACATGGTG
ACCGCCGTCC TGCTGGGGCT GACCCTCGCT TTCGAGCCCA AAGAGCCCGG CATCATGCTG
CGTCCCCCGC GCGATCCGAA GACGCCGATT CTCACACGCT ACCTTCTCTG GCGCATCATC
CTCGTGGGCG GGATGCTCAC CGCCGCCGGT TTCGGCCTCT TCGAATGGGA GCTGCACCGG
GGAGCGAGCG AGGCTCAAGC CCGCACCGTG GCGGTGAACG TCTTCGTGGT TGCCGAAATC
TTCTACCTGC TCAACTGCCG GTCGCTGACC AAGTCCATGT TCCAGCTGGG CCTCTTCTCC
AATCCGTGGC TCTTTGTCGG CGTCTCACTC ATGGTCCTCC TGCAGCTCCT CTACACCTAT
CTGCCCGCCA TGAACTGGAT GTTTCACGGT GCCCCGATCC CCCTCGACGC CTGGGGATAT
ATCCTTGCCA CGGGCCTGGC GGTCTACCTG GTGATCGGGT TTGAAAAATG GGTGCGACAG
AGAACGAGCG GGGGCGGCAA GGAGCAAGCC GTCGGGAAAG CGCCTTGA
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| Protein sequence | MERLMAKHWH HMPGGEASEL LQTNPERGLE EFEAKRRQEH FGPNVITGKG GKGPLMRFLL
QLHQPLIYIL IAAGAVTAAF REWVDSGVIF GVVLVNASIG FLQESKALAA IAALAQTMVA
EVTVLRGGSR RRISSAEVVP GDLILLQSGD KVPADMRLIE LKDLQIDEST LTGESVPVKK
KRGVLDRDTV LADRRNMVYA STLVTYGQGT GVVVATGNAT EVGRISELIS AAPELQTPLT
KKIAHFSHIL LYAILALAAA TVLIGVLRGQ PALEMFMAAV ALAVGAIPEG LPAALSITLA
IGVARMARRR AVIRRLPAVE TLGSTTVICT DKTGTLTENQ MTVQEIFAGD ETFEVSGAGY
DPSGTVLKQG EPITHGGTPV LFECLRAGLL CNDSILVQKE GRWGVQGDPT EGALIVVAAK
VGLSADEEAA RLPRLDVIPF ESERQYMATL HDAGQAETPI AYVKGAAEII LERCTESLDA
TGAAQPVDRE RVMAEVGRMA SNGLRVLAFA KKDISPESAP FDHEDVAGGL RFLGLQGMID
PPRAEAIEAV KACHTAGIRI KMITGDHAIT ASAIAEKIGL IDAGDSAPAG KAAITGKTLA
KMPDAELIEA AEETPVFARV DPEQKLSLVE ALQARGHIVA MTGDGVNDAP ALKRANIGIA
MGITGTEVAK EAADMILTDD NFATIEAAVE EGRGVFDNLT KFIVWTLPTN LGEGLVILLA
IFAGATLPIL PVQILWINMV TAVLLGLTLA FEPKEPGIML RPPRDPKTPI LTRYLLWRII
LVGGMLTAAG FGLFEWELHR GASEAQARTV AVNVFVVAEI FYLLNCRSLT KSMFQLGLFS
NPWLFVGVSL MVLLQLLYTY LPAMNWMFHG APIPLDAWGY ILATGLAVYL VIGFEKWVRQ
RTSGGGKEQA VGKAP
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