| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1082 |
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| Symbol | |
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| ID | 4460847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1336934 |
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| End bp | 1338304 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701847 |
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| Product | hypothetical protein |
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| Protein accession | YP_845211 |
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| Protein GI | 116748524 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.699767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGGA AGACGAAGCC CGTGCGCAGC GGAAACCTGG TGCTCTGGAA CACCCTGCTC
CTCGCATTCC GTGAAATCCG GCGCAATGTC ATGCGTTCGG TGCTGACCAT CCTCGGCATC
GTCATCGGCG TTGCCGCCGT GATCGTCATG GTCACCATCG GCGGGGGCGC CACGGTGCAG
GTCAAACAGC AGATCGCGAG CATGGGCAGC AACCTGCTCA TGGTCACGCC GGGGAAAAGA
CTCGGTCCGG GCCAGTCCAC CGGCAGTATT CCCTTCAAGG AATCCGACGC CGCGGCCATC
GCCAGGGAGG TCAACGCCGT CAAGGCGGTG GCCCCGCTTT CGACCCAGTC GGCCAAAGCC
GTCTTCGGGA ACCAGAACTG GTCGACCCAG GTTGCCGGGA GCAACAACCG GTATCTACAG
GTCACGAACC GCTCAATCCA GTCGGGCAGG CAATTCACCG ACAGCGAAGT GCGCAGCGGC
GCGGCCGTCT GTATCATCGG GGAAACCGTT CGAGCAAAGC TCTTCGGAGG GCAGGGGGCG
ATCGGGGAAA AGATCCGGCT GCACGGCACC AGCACCAGTA CGAGTACCAG TGCCGGTACG
AGCACCAGCG GCAGCACCGG TACCGGCAGC AGCAGCGGGA GCAGCGGCAG CGGCACCAGT
ACCGGCGGCA CCACCACCAC CACGAGCACT AACCTTTCCT GCGAGGTGAT CGGTCTTCTG
GCGGCAAAAG GACAGAGCAC CATGGGCACC GATCAGGACG ATTTCGTTGT GATCCCTCTG
GCCGCCTATC AGCGACGCCT TGCCGGGAAT CAGGATGTCG GTATCATCCA GGTTTCCGTC
GAGGAAGGCG TCTCTACGGA AAAAGTCCGG CAGGATATTG TGCGCCTGCT GCGGGAGCGC
CGTCATCTCT CGCCGAGCGA CGATGACAAT TTCAATGTCA TGGACATGAA GGAGATCGTC
AAAATGCTCA CCGGGACCAC TCAGATGATG ACGGCCCTGC TCAGCGCCGT GGCGGCGGTG
AGCCTGCTGG TGGGTGGGAT CGGCATCATG AACATCATGC TGGTGTCGGT GACCGAGCGC
ACCCGGGAGA TCGGCATCCG CCTCGCCGTC GGCGCGCTCG AGAGCGAGGT GCTCATGCAG
TTCCTTGTGG AGGCGGTTGT TCTTTCCTCC TTCGGCGGTG TGATCGGGAT CGTGCTGGCG
CTCACCACCT CCGTCTGGCT GGCCGGAGTC TTACACGTCC CCTTTGTCTT CAATGCGGGC
ATCGTGGTGC TTGCATTCCT TTTTTCCGCG GCGGTGGGCG TGATCTTCGG TTATTTCCCC
GCGCTCAAAG CCGCCCGCCT GGATCCCATC GAGGCTTTGC GGCACGAGTA A
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| Protein sequence | MPWKTKPVRS GNLVLWNTLL LAFREIRRNV MRSVLTILGI VIGVAAVIVM VTIGGGATVQ
VKQQIASMGS NLLMVTPGKR LGPGQSTGSI PFKESDAAAI AREVNAVKAV APLSTQSAKA
VFGNQNWSTQ VAGSNNRYLQ VTNRSIQSGR QFTDSEVRSG AAVCIIGETV RAKLFGGQGA
IGEKIRLHGT STSTSTSAGT STSGSTGTGS SSGSSGSGTS TGGTTTTTST NLSCEVIGLL
AAKGQSTMGT DQDDFVVIPL AAYQRRLAGN QDVGIIQVSV EEGVSTEKVR QDIVRLLRER
RHLSPSDDDN FNVMDMKEIV KMLTGTTQMM TALLSAVAAV SLLVGGIGIM NIMLVSVTER
TREIGIRLAV GALESEVLMQ FLVEAVVLSS FGGVIGIVLA LTTSVWLAGV LHVPFVFNAG
IVVLAFLFSA AVGVIFGYFP ALKAARLDPI EALRHE
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