| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1061 |
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| Symbol | |
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| ID | 4460669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1309523 |
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| End bp | 1310512 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639701825 |
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| Product | putative tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase / fibronectin/fibrinogen-binding protein |
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| Protein accession | YP_845190 |
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| Protein GI | 116748503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.391536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.569731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC GGAAAGCAAA AGGAATCGGG CTCATCTCGG GCGGCCTGGA CAGCATGCTG
GCTGCACGGG TCCTCAAGGA CCAGGAACTC GAGCTCATCG GCATCATTTT CAAGACACCC
TTCTTCGGCC CCGGGCAGGG AATGGACGTG GGACGAACGG TGGGAATCCC GGTGCGCGTC
ATCGATTTCA CCGACCGGCA TCTCCAAATG CTGAAAAATC CCGTATACGG CTACGGCAGC
CAGATGAATC CATGCATCGA CTGCCATGCC CTGATGCTTC GCGAGGCCGG CCGCGTCATG
GAACGGGAGG GGGCGGATTT CCTGTTCACC GGGGAGGTGC TGGGGCAGCG TCCCATGAGC
CAGCGGCGCG ACTCCCTGCG CAGCGTGGAG AAGCTCTGCG GCTATCCCGG CCGAGTCCTG
CGCCCTCTGA GCGCCAAACT GCTGCCGCCC ACGGTGGTCG AAATCGAGGG GCTGGTGGAC
CGCGAACGGC TGCTCGACAT TCACGGCCGG TCGCGAAAGC GCCAGGAGGC CCTTGCCCGG
CATTACGGCA TCACGGATTA TCCCCAGCCG GGCGGCGGCT GCATGCTCAC CAAGGAAGGT
TTCGCCCGGA GGCTCAAGGA GCTGTTCGCC CGTTACCCGG AAGCGGGACC ACGTGAGGTG
GAGCTGTTGA AATGGGGCAG GCATTTCGCA CTGCCCGGGG GAAGCATCTG CATCATAGGC
CGCAATGAAG CGGACAATTC GCGGCTGGCA CAGTTCGCAG GCCCGGAAGA CATCGTCCTG
CGGGTCGCCG ACTACCCGAG CCCGACCGGT GTGGTCATCG CGTCGCCTTC CGCGGACCGG
GACCTGCAAC TCGCCGCGGC CATCGTGACC GCCTACAGCG ACTGCCCGCG CGACGTCCCC
GTGAAGGTGT CCTGGAGGCG GGGGGAAACT TCGGGCACCC TGAGCGGGCC GCCCTCCGAC
CGGCTTGAAT ACAGGAGTCT CCTCATCTGA
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| Protein sequence | MTSRKAKGIG LISGGLDSML AARVLKDQEL ELIGIIFKTP FFGPGQGMDV GRTVGIPVRV
IDFTDRHLQM LKNPVYGYGS QMNPCIDCHA LMLREAGRVM EREGADFLFT GEVLGQRPMS
QRRDSLRSVE KLCGYPGRVL RPLSAKLLPP TVVEIEGLVD RERLLDIHGR SRKRQEALAR
HYGITDYPQP GGGCMLTKEG FARRLKELFA RYPEAGPREV ELLKWGRHFA LPGGSICIIG
RNEADNSRLA QFAGPEDIVL RVADYPSPTG VVIASPSADR DLQLAAAIVT AYSDCPRDVP
VKVSWRRGET SGTLSGPPSD RLEYRSLLI
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