Gene Sfum_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1015 
Symbol 
ID4460951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1250551 
End bp1251927 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content60% 
IMG OID639701778 
Productnitrogenase molybdenum-iron protein beta chain 
Protein accessionYP_845144 
Protein GI116748457 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01286] nitrogenase molybdenum-iron protein beta chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.502201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCC GACACACACC GGAAGCAATT CGGGAGCGCA GAGCCCTGAC GATCAATCCG 
GCGAAAACCT GTCAGCCGAT CGGGGCGATG TACGCCGCCC TGGGGATACA CCGATGCCTG
CCGCACAGCC ATGGCTCCCA GGGTTGTTGC GCCTACCATC GCAGCACGCT CACGCGGCAT
TTCAAGGAAC CGGTCATGGC GGCCACGAGT TCCTTCACCG AGGGTGCTTC GGTTTTCGGC
GGACAGTCCA ATCTCATCCA GGCCATAGAC AATATCTTCA CCGTGTATGA GCCGGATGTC
ATTGCCGTTC ACACCACGTG CCTTTCGGAA ACCATCGGGG ACGATATCCC GCAGATATCG
CGCAAGGCGC AGGCGGAAGG GAAGATCCCC CCCGGCAAGT TCGTCATTCA CGCCAACACG
CCCAGCTACG TGGGTTCCCA TGTGACCGGG TTCGCCAACA TGACGAAGGC TATGGCGGAT
TATTTCGCGG AGCGCGGCGG AAAAAGGCTC GAGCAGATCA ACATCATTCC GGGTTACGTC
GAACCCTCCG ACATGGAGGA GATCCGAAGG ATCGCCGCGG AGATGGGAGT TCGGGCGGTC
GTGTTTCCCG ACACCTCCAA CGTGTTGAAT CGCCCGCAGA CCGGGAAGTT CGAGATGTAT
CCCAGGGGAG GAGTATCCAT CGAAGCCCTC AGGAGCGCCG GGTCGAGCAA GTGTACCGTC
GCGCTCGGGC GAACTGCCTC GTGGCCTGCC GCACGGGCCC TGGACGTGAA GTGCAACGTC
CACTGCGAAC TGCTGGACCT GCCCATCGGA CTCACCGCAA CGGACGCATT CATCGATGTG
TTGAGAAGGG TGGCGGGGGT GAGCGTTCCC GATTCGATCA ACCTTGAGCG GGGGCGCCTG
CTCGACATCG TCACCGATAT GCACCAGTAT TTTTATGGGA AAAAGCTGGG GCTTGTCGGC
GACCCCGACC AACTCGTCTC CCTCGCGGAG TTTCTCGTCT CCATCGACAT GTGGCCCATC
CACATCGTCA CGGGGACGCC CGGAAGAAAG TTCGAGTCCA GGATTCGGGA AATCACGCGG
GGTGTCCCTC ACGAAGTCAA CGTGACGGCC GGCGGCGACA TGTTCCTCTT CCACCAGTGG
ATCAAGAACG ACCCGGTGGA CCTCATCATG GGGAACACAT ACCTGAAGTA CATCGCAAGG
GACGAAGACA TTCCGCTGGT CCGGTTCGGG TTTCCGATCC TGGATCGTGT CGGCCACGGC
TATTTTCCCA CCGTCGGGTA TCGGGGGGGG ATGCGGCTGC TGGAAAAAAT CCTGGATGCC
CTTCTCGACC GCAAAGACCG GGATGCTCCG GAGGAAGCGT TCGAGTTGGT GCTGTAG
 
Protein sequence
MLLRHTPEAI RERRALTINP AKTCQPIGAM YAALGIHRCL PHSHGSQGCC AYHRSTLTRH 
FKEPVMAATS SFTEGASVFG GQSNLIQAID NIFTVYEPDV IAVHTTCLSE TIGDDIPQIS
RKAQAEGKIP PGKFVIHANT PSYVGSHVTG FANMTKAMAD YFAERGGKRL EQINIIPGYV
EPSDMEEIRR IAAEMGVRAV VFPDTSNVLN RPQTGKFEMY PRGGVSIEAL RSAGSSKCTV
ALGRTASWPA ARALDVKCNV HCELLDLPIG LTATDAFIDV LRRVAGVSVP DSINLERGRL
LDIVTDMHQY FYGKKLGLVG DPDQLVSLAE FLVSIDMWPI HIVTGTPGRK FESRIREITR
GVPHEVNVTA GGDMFLFHQW IKNDPVDLIM GNTYLKYIAR DEDIPLVRFG FPILDRVGHG
YFPTVGYRGG MRLLEKILDA LLDRKDRDAP EEAFELVL