Gene Sfum_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1012 
Symbol 
ID4460948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1247452 
End bp1248816 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content62% 
IMG OID639701775 
Productnitrogenase 
Protein accessionYP_845141 
Protein GI116748454 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.430786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGT TGCCATATGT CTCCACCACC AATGCCTGCA AGCTCTGCGG GCCCCTTGGG 
GCCTGCCTGG CCTTTCGCGG CGTCGAAGGC GCCGTGCCGA TGCTGCACGG GTCCCAGGGC
TGCGCGACAT ACATGCGCCG CTACATCATC AGCCATTTCA GGGAACCGAT GGACATCGCC
TCGTCGGCTC TAGGAGAAAA ACACGCGGTC TACGGAGGTG GAGCCAATCT CAAGCAGGGA
CTGAAGAATG TGATGACCAA ATTCGGTGCC AGGCTGATCG GCATCGCCAC CACCTGCCTT
ACGGAAACCA TCGGAGAGGA CGTCCCGATG ATCGTGGAGG AGTTCCGACG GGAGATACGG
CGCAAGGGCG GCGAGGAGCC GCCCGCCTTC GTGAGCGTCC GGACCCCCAG CTATTCCGGA
ACTCACATGG AAGGGTTTCA CGGAGCGGTT CGGGCGGTGG TGGAGCAATT GGCGGGCGAG
GGACACGCGG CACGGATGCT CAATCTGCTG CCCGGCTTTC TCTCACCGGA AGATCTGCGC
CATCTCAAGG AAATTCTCGC GGCCTTCCGG TGCGCGGCGA CGATCCTGCC GGACATCTCC
ATGACCCTGG ACGGCCCGGC GCTCGACGAC TACCCCAAAA TTCCCGGCGG CGGAACTCCA
ATCGAGGACA TATGGCGCAT GGGAGGCGCC GGCGCGACGT TCGAGCTCGG CAGGACCCTG
CACGGTGACC CGCAATCGAC GGGAAAGCTT CTCAAGGAGC GCTTCGAGGT GGCTCTGCAC
TCGATGGGGG TCCCCATCGG CTTGCGGGAG ACCGACACCT TCTTCGGTGC CCTGGAGCAA
CTGACAGGGA TGGAGCGCTC GCCGCGTTTC GCCATGGAGC GGGGTCGCCT GGTGGATTCC
TATGTGGACG CGCACAAGTA TTTGTTTGGA AAACGGGCGG TGGTCTATGG GGAAGAAGAC
CTGGCGGTCG GGCTGACAGC GTTTCTCGCC GAAGTCGGGA TCACGCCGGT GCTCTGCGCA
ACCGGGGGCA GGAGCGGACG TTTTCGATCG GCGGTTGAAC AGGTCACGGC CGATATTCTT
CCCGAAGCGC CGGCCGTGGG GGAAGGGATG GACTTCAGGC AAATCGAAGA ACAGGCCGAA
ATCCTTTCCC CCGATATCAT GATCGGCCAC AGCAAAGGCT ATTCCATCGC CCGGAAACTC
GGCATTCCCC TTGTTCGGGT AGGTTTTCCC ATCCACGACC GGTTCGGAGG GCAGAGAACG
CTTCACGTGG GGTACCGGGG CACCCAGTCT CTGCTCGACC GGATTGTCAA CGGGCTCATC
GAGGGAAACC AGAACAATTC GCCGGTAGGC TACGGATACA TGTGA
 
Protein sequence
MEPLPYVSTT NACKLCGPLG ACLAFRGVEG AVPMLHGSQG CATYMRRYII SHFREPMDIA 
SSALGEKHAV YGGGANLKQG LKNVMTKFGA RLIGIATTCL TETIGEDVPM IVEEFRREIR
RKGGEEPPAF VSVRTPSYSG THMEGFHGAV RAVVEQLAGE GHAARMLNLL PGFLSPEDLR
HLKEILAAFR CAATILPDIS MTLDGPALDD YPKIPGGGTP IEDIWRMGGA GATFELGRTL
HGDPQSTGKL LKERFEVALH SMGVPIGLRE TDTFFGALEQ LTGMERSPRF AMERGRLVDS
YVDAHKYLFG KRAVVYGEED LAVGLTAFLA EVGITPVLCA TGGRSGRFRS AVEQVTADIL
PEAPAVGEGM DFRQIEEQAE ILSPDIMIGH SKGYSIARKL GIPLVRVGFP IHDRFGGQRT
LHVGYRGTQS LLDRIVNGLI EGNQNNSPVG YGYM