| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1010 |
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| Symbol | |
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| ID | 4460946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1244292 |
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| End bp | 1245824 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701773 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_845139 |
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| Protein GI | 116748452 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.502201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC GGATAAGAGA AACGGAACTC AACGTGATTT TCGAAACGTG CAGGGTCATC
GGACAGGCGC TGAAGCTCGA CCAGGCCCTT GACACGATTC TGGCGATTCT CTCCTCCTCC
CTCGCCATGA AACGCGCCAC AATCACGCTC GAGGACGAGG ATACCGGCTA CCTCATCATC
CGGGCTTCCC ACGGCTTGAC CGATGCGGAA CGGAGACGGG GGGTCTACCG GAAGGATGAA
GGGATCACCG GGCTGATTTT CCAGTCCGCC GATTCCTACG TGGTGCCGGA CATCAGCAAG
GAACCCCTGT TTCTGAACAA GACGCGCTCG AGACTGATTC AAAAGGAGTC CATCAGTTTC
CTCGGGGTTC CCATATTGTT GCACGGCAAG GCCATCGGCG TTCTGCACGT GGACCGGTTG
TTCGGCGACG AGGTCCCTTT CGAAGAGGAC ATCCGGCTCC TGTCCATCGT GGCGACCCTG
ATCGCCCAGT TCGTCAGTCT GAACCGCCAG GTAAAACTGC GCGAGGCCAA ACTGCTCAGG
GATTGCTCGC CGTCCGGAAA GAAAGGGATC GAAGCTGGGG ACCGCTTCTT CATGGTGGGC
AGGAGTCCGT CGATGCTCGT CGTACAGCGT CATATCGAGA AGGTGGCGCC GAGCAAGGCT
TCGGTGCTTC TCCTGGGAGA GTCTGGAACG GGAAAAACGC TGGTGGCTCA AATGCTGCAC
GAGCTGAGCA TCAGGTCCAG CGCGCCTTTT GTGAAGATCA ATTGCGCGTC TCTGCCCGAG
AACCTGCTCG AATCGGAGCT CTTCGGTTAT GAGAAGGGCG CATTCACCGG CGCGGTGAGA
TCGAAGCCCG GGAGAATCGA GGAAGCGGAG GGGGGGACCG TTTTTCTTGA TGAGGTCGGC
GAGCTTACGC CGGCGCTCCA GGCCAAGTTG CTTCGTTTTC TCCAGGATAA GGAATTCGAG
AGGCTCGGGA GTACTCGGAC CAGGGTGGTC GACGTGCGGG TGCTCGCCGC CACGAACCGG
GACCTTGCCG CGGTGGTGGC GGAAGGAACG TTTCGGGAGG ACCTCTACTA CAGGCTGAAT
GTCTTCCCCA TTCAGATCCC CCCTCTCAGG GCACGCAAGG AAGACATTCC GGATCTGTTG
CATCATTTCC TGGACAGAAT ATCCCGGGAA TACGGCCGCC GCATCGGAAT AACCAACGCC
GCGATGGCAT TGCTCGCGGG ATATGACTGG CCGGGCAACG TGCGGGAGAT GGAGAACCTG
GTGGAACGCA TGGTGATCAT GGCCGATGAG GACGAGATAG GCGTGAACGT GTTGCCTCCG
TTCTTGAGCG AGCAGATGAC GGGTAGCGGG GGCGAAACGC TTTCCCGAAT AGAGAAAATG
GAGCGCAAGG AAATCCTGGC GGCACTGGAA CGCAACGGAT GGAACCAGAC GCGCACGGCA
AAGGAGCTCG GCATAACACT CAGACAGATT GGCTATCGGG TCAGGAAATT CGGGCTGGAC
AGGCTTTTGA TGCACCAGCG GCGAGGAGGG TAG
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| Protein sequence | MEKRIRETEL NVIFETCRVI GQALKLDQAL DTILAILSSS LAMKRATITL EDEDTGYLII
RASHGLTDAE RRRGVYRKDE GITGLIFQSA DSYVVPDISK EPLFLNKTRS RLIQKESISF
LGVPILLHGK AIGVLHVDRL FGDEVPFEED IRLLSIVATL IAQFVSLNRQ VKLREAKLLR
DCSPSGKKGI EAGDRFFMVG RSPSMLVVQR HIEKVAPSKA SVLLLGESGT GKTLVAQMLH
ELSIRSSAPF VKINCASLPE NLLESELFGY EKGAFTGAVR SKPGRIEEAE GGTVFLDEVG
ELTPALQAKL LRFLQDKEFE RLGSTRTRVV DVRVLAATNR DLAAVVAEGT FREDLYYRLN
VFPIQIPPLR ARKEDIPDLL HHFLDRISRE YGRRIGITNA AMALLAGYDW PGNVREMENL
VERMVIMADE DEIGVNVLPP FLSEQMTGSG GETLSRIEKM ERKEILAALE RNGWNQTRTA
KELGITLRQI GYRVRKFGLD RLLMHQRRGG
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