| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1005 |
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| Symbol | |
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| ID | 4460941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1233239 |
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| End bp | 1235815 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701768 |
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| Product | hypothetical protein |
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| Protein accession | YP_845134 |
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| Protein GI | 116748447 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.166389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGGGTCC GGTTCAGCTT TCGCCACCTG CGTGCCCATC CTTGGCGCAC GCTTGCAGTA
TTGTTCGGGA TCGGCCTCGG AGCCGCGGTT TTCACCAGCG TGAGGCTGGC TTCCGACGCT
TCGATCGGTT CCTTCAGGGT CAGTGTCGAA GCCCTTTCCG GCAAAGCCCA ATGGACGCTG
GCATGTCCGG GGGGGCGGGT ACCGGAGGGG ATTGTGGCGG ATTTGATGCG CTATCCTGCC
GTGCAGACCG CATCGCCCTT CCTGTCCACC TATGTTCATC CTGCCGGAAA AGCGGCCGAG
GCCTTTCTTT TGATCGGCAT CGATCCCATA CTGGATCGTC CGCTGCGCAC ATGGCGGACC
GGGGCCGCCG ATTCTCCCGA ACGGTCGCTG CCCTGGTTGA AACTGATGAC CGAGCCCAAC
ACCCTTTTGG TGGGAGAAGC GGTTCTGCAA TCCCCGGGAT CGGGCTCGGG CGACGGCGTC
GAGCTGGCCG GACCGCGGGG CGTGAAACGT TTCACCGTCC TTGGCACGCT CACCTTTGAA
GGGCTCGGCA TGGTGGAGGG AGGGCGCGTC GCCATCGCCG ATATTGCGAC ATTCCAGGAA
TTCACGGGCC TGACGGGCCT CGTGGATCGA ATCGATCTCC TCTTCAAACC CGGGGCCACG
GACAAAGACG TGGACGCCGT CAGGGCAAAC CTCCCGCGGG GTGCCGTGCT GGAACGCCCA
TCGGAATCGG CCGAGAGCGG AGAGGGAATG ATACGGGCCT ACCAGCTCAA TCTTTCCGTG
CTCAGTTTCG TTTCCCTCTT CGTGGGCATG TTCCTGGTCT ACAGCCTCAT TTCCCTCCAC
GCCACGGCAC GACGTCATGA AGTGGCGATC CTGCGATCGA TCGGTTCCTC GTCGCGCATG
GTTTTTCTGC TCTTCTTTTC CGAAGGGCTT TTCTTCGGCA TCGCGGGGTG GCTGATCGCC
ATTCCGCTGA GCTCATTCAT GGTCCGCCAT CTGCTGGGCG GAATCAGCTC CACCATCTCC
AGCCTCTTCG TCCGTATCCA GGTCCAGGAT CTGATGCTCA ACCCATGGGA GGTCGTGCTT
TCCTTCGCGC TCACCGTCCT GGTCGCCCTT ACGGCCGCAC TCCAGCCGGC CTGCTCCGTC
ATGACCGTTC CTCCGCGGGA GGCCCTCGCC GCGCGTGACG CCGTCGTCCC GCGACGCACT
TCGCCGGTCC GGACTGGGTT CCTGGGCCTT TTTCTCGCGG CGGTCTCGTG GCCTGTCTCC
CAGTACCAGG GGGTATCGGG CGTTCCCGTC GCCGGCTATC TCGGCACATT TCTTCTGTTC
TGCGGCTTCT CGCTCACTTC CCCGTTCATC CTTCGGCTGA TCGGGTCTCA CCTTTCGCCC
GTGTTGAGAC GCCTGGGCGG AGAACCCGCC TTTCTTGCCG GGCGGTTCAT CCGCGACTCG
GGAACGCGGA TCGCCATTTC CGTGGGAGCG CTGATCACGG CCATCGCCCT GTTCGTTTCG
CTCGCCATCA TGATTCACAG TTTTCGAAAC ACCGTGCAGC TCTGGGTCGA CCAGAGCATA
CGAGGCGACC TGTATCTTCG CTCCGCCATG GCCGACATCA ACCGGTACCG CAACCACCTT
CCCGGCGAAG TCGCGGACCG GCTCCGTCTG CTGCCCCGTG ACGCCGACGT GCTGCCATAC
CGGAGAATCT ACCTCCGGCT CGGGACCGTG CCCTACCAAT TCGAAGCGCT GGATTTGCGC
ATATTCTTCC GTCACGCCAA CCTGCTGTTG CTGGATGCCC GCCTCGACGA AATCGCTCCC
GCGCTCCTTG ACGGAAAGGG CGTCGTGGTT TCCGAGGTGT TCGCAAGCCG GACGGGTTTG
AATTCTGGAA AACGCTTTCG GGCCAACATC GAAGGGTACG ACTTCGATCT GCCGGTATTG
GGCGTTTTCC GCGACTACAG AACCCAGGGA GGAGGCGTGA TCTACTATCC GTTCGAGCAT
TTCGCGGATC GAACCGGAGA CCCGTCCTGG AGTGGAGCGA GCGTCTATCT CCAGGGATCG
GAGACCACCC GTGAAGAAAA AGCCGCTCAA CTGCGCACCA GGCTCCTGAG CGATTTCCCA
CCGGAGCGAT ACGCGCTCCA GATGACTCTG GGCAGCGAAT TGAGGCGGGC GATTCTGCGC
ATCTTCGACG AAACTTTCGC CGTCACCTCC GTCCTTCTCC TGATCGCATT GATCGTCGCC
GCCCTCGGAA TGACCACCAC CCTCACGGTC CTGGTCCTGG AGCGCACTCG CCAGATACAC
ACCATAACCG CCACGGGGGC CGGTCACGGA CAGATCCGCG CGATGATTTT CTGGGAAGCC
CTGCTTATGA CGCTGGTGGG TGAAGTCGTC GGGCTCGGCT GCGGTTTCGC ACTGTCACAT
ATCCTGATTT TCGTGATCAA CCGACAATCT TTTGGCTGGA CATTCCTCTA CGGCGTGGAC
TGGTTCGCTC TGGCCATGTC GCTGCCGCTG ATTCTCGCCG CCTCCCTGCT GTCGGCAATT
CCGGCCGCTC AGCTGGTTTT CAGGCAATCG CCGGCCCTGG TGCTCAGAGA GCATTGA
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| Protein sequence | MWVRFSFRHL RAHPWRTLAV LFGIGLGAAV FTSVRLASDA SIGSFRVSVE ALSGKAQWTL
ACPGGRVPEG IVADLMRYPA VQTASPFLST YVHPAGKAAE AFLLIGIDPI LDRPLRTWRT
GAADSPERSL PWLKLMTEPN TLLVGEAVLQ SPGSGSGDGV ELAGPRGVKR FTVLGTLTFE
GLGMVEGGRV AIADIATFQE FTGLTGLVDR IDLLFKPGAT DKDVDAVRAN LPRGAVLERP
SESAESGEGM IRAYQLNLSV LSFVSLFVGM FLVYSLISLH ATARRHEVAI LRSIGSSSRM
VFLLFFSEGL FFGIAGWLIA IPLSSFMVRH LLGGISSTIS SLFVRIQVQD LMLNPWEVVL
SFALTVLVAL TAALQPACSV MTVPPREALA ARDAVVPRRT SPVRTGFLGL FLAAVSWPVS
QYQGVSGVPV AGYLGTFLLF CGFSLTSPFI LRLIGSHLSP VLRRLGGEPA FLAGRFIRDS
GTRIAISVGA LITAIALFVS LAIMIHSFRN TVQLWVDQSI RGDLYLRSAM ADINRYRNHL
PGEVADRLRL LPRDADVLPY RRIYLRLGTV PYQFEALDLR IFFRHANLLL LDARLDEIAP
ALLDGKGVVV SEVFASRTGL NSGKRFRANI EGYDFDLPVL GVFRDYRTQG GGVIYYPFEH
FADRTGDPSW SGASVYLQGS ETTREEKAAQ LRTRLLSDFP PERYALQMTL GSELRRAILR
IFDETFAVTS VLLLIALIVA ALGMTTTLTV LVLERTRQIH TITATGAGHG QIRAMIFWEA
LLMTLVGEVV GLGCGFALSH ILIFVINRQS FGWTFLYGVD WFALAMSLPL ILAASLLSAI
PAAQLVFRQS PALVLREH
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