Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0975 |
Symbol | |
ID | 4460017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1198267 |
End bp | 1199442 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639701738 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_845106 |
Protein GI | 116748419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0624997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCGC TTTTTCAGAG ACTGAGCCGA CGGTACGGCG TCCATTCGAA ACGTTCGAAG GACTCCGTTG AAGCCGTCAC GGACCCCGCC ACCGGTGTCT ACCCGGAGGG AAACTTCAAC GAGATGCTTG CTTTCGAAAG AAAGAGGGCG GAGCGCTCCA AGCGACCGTT CATGCTCATG CTCCTGGACA TTTCCGTTCT TCCTTCCGGC TATAATGGAG ACAATCCGAG GAAGAAGGTC ATCTGTTCCC TGTCTTTTTC CACCAGGGAG ACCGACATCG TGGGTTGGTA CAAGGGTGAC GACGTTCTCG GAGTCCTGTT CACGGAACTG GGTGAATCGG ACAGCGCGGT CGCGGCCGGA AAGATTCTCG ACCGGGTGTG CGAAAACCTC ACCACCAACC TGGACGGCAA GAGGGTGAAG GACATCGACA TTACGATACA CCTGTTCCCG GAAGAGTTCG ATAAACCGAA TCTGCGGTAC TCCTCCGACC TCAAGCTCTA TCCGGACCTC GAGACGAAGA ACACCTCCAA GAGGATCGCT CTGGCCGTCA AGAGAGGGAT TGACATCGCG GGCAGCCTAT TCGCCCTGGT GCTTTTTTCC CCCCTTTTCC TGACCCTCTC CGCACTGATC AAATGGACTT CCAAAGGCCC GGTCTTTTTC AGGCAAAGCA GGGTCGGGCA GTTCGGCAAG CCTTTTATGA TGTATAAATT TCGATCGATG TTCGTGGACA ATGACCCGGG GATACACCGG GAGTACATAA AGCAGTTGAT CGGCTCCGGC GACCGGCCCG CGAAGGAGTG CGCGCGGGGG GAGGAGCAGG TTTTCAAGAT TCAGCACGAT CCCCGGGTCA CGTCGATCGG AAGATTTCTT CGCAAGACAA GCCTCGATGA GCTGCCTCAG TTCATCAATG TCCTGAAAGG TGAAATGTCC CTTGTGGGAC CAAGGCCTCC GATCCCCTAT GAGCTCGAGT GCTACGACAC CTGGCATCGA CGCCGGCTCA TGGAGATGAC GCCGGGAATA ACCGGTCTCT GGCAGGTCAC CGCCAGAAGC CGGACCACCT TCAACGAGAT GGTCCGTCTG GACATCCGTT ATGCGCGAAG ATGGTCCCTT TGGCTGGACA TCAAGCTGCT CGTGTTGACG CCGTGGGTCG TTCTGAGGAG CAGGGGAGCA TACTGA
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Protein sequence | MESLFQRLSR RYGVHSKRSK DSVEAVTDPA TGVYPEGNFN EMLAFERKRA ERSKRPFMLM LLDISVLPSG YNGDNPRKKV ICSLSFSTRE TDIVGWYKGD DVLGVLFTEL GESDSAVAAG KILDRVCENL TTNLDGKRVK DIDITIHLFP EEFDKPNLRY SSDLKLYPDL ETKNTSKRIA LAVKRGIDIA GSLFALVLFS PLFLTLSALI KWTSKGPVFF RQSRVGQFGK PFMMYKFRSM FVDNDPGIHR EYIKQLIGSG DRPAKECARG EEQVFKIQHD PRVTSIGRFL RKTSLDELPQ FINVLKGEMS LVGPRPPIPY ELECYDTWHR RRLMEMTPGI TGLWQVTARS RTTFNEMVRL DIRYARRWSL WLDIKLLVLT PWVVLRSRGA Y
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