Gene Sfum_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0975 
Symbol 
ID4460017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1198267 
End bp1199442 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID639701738 
Productundecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_845106 
Protein GI116748419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0624997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGC TTTTTCAGAG ACTGAGCCGA CGGTACGGCG TCCATTCGAA ACGTTCGAAG 
GACTCCGTTG AAGCCGTCAC GGACCCCGCC ACCGGTGTCT ACCCGGAGGG AAACTTCAAC
GAGATGCTTG CTTTCGAAAG AAAGAGGGCG GAGCGCTCCA AGCGACCGTT CATGCTCATG
CTCCTGGACA TTTCCGTTCT TCCTTCCGGC TATAATGGAG ACAATCCGAG GAAGAAGGTC
ATCTGTTCCC TGTCTTTTTC CACCAGGGAG ACCGACATCG TGGGTTGGTA CAAGGGTGAC
GACGTTCTCG GAGTCCTGTT CACGGAACTG GGTGAATCGG ACAGCGCGGT CGCGGCCGGA
AAGATTCTCG ACCGGGTGTG CGAAAACCTC ACCACCAACC TGGACGGCAA GAGGGTGAAG
GACATCGACA TTACGATACA CCTGTTCCCG GAAGAGTTCG ATAAACCGAA TCTGCGGTAC
TCCTCCGACC TCAAGCTCTA TCCGGACCTC GAGACGAAGA ACACCTCCAA GAGGATCGCT
CTGGCCGTCA AGAGAGGGAT TGACATCGCG GGCAGCCTAT TCGCCCTGGT GCTTTTTTCC
CCCCTTTTCC TGACCCTCTC CGCACTGATC AAATGGACTT CCAAAGGCCC GGTCTTTTTC
AGGCAAAGCA GGGTCGGGCA GTTCGGCAAG CCTTTTATGA TGTATAAATT TCGATCGATG
TTCGTGGACA ATGACCCGGG GATACACCGG GAGTACATAA AGCAGTTGAT CGGCTCCGGC
GACCGGCCCG CGAAGGAGTG CGCGCGGGGG GAGGAGCAGG TTTTCAAGAT TCAGCACGAT
CCCCGGGTCA CGTCGATCGG AAGATTTCTT CGCAAGACAA GCCTCGATGA GCTGCCTCAG
TTCATCAATG TCCTGAAAGG TGAAATGTCC CTTGTGGGAC CAAGGCCTCC GATCCCCTAT
GAGCTCGAGT GCTACGACAC CTGGCATCGA CGCCGGCTCA TGGAGATGAC GCCGGGAATA
ACCGGTCTCT GGCAGGTCAC CGCCAGAAGC CGGACCACCT TCAACGAGAT GGTCCGTCTG
GACATCCGTT ATGCGCGAAG ATGGTCCCTT TGGCTGGACA TCAAGCTGCT CGTGTTGACG
CCGTGGGTCG TTCTGAGGAG CAGGGGAGCA TACTGA
 
Protein sequence
MESLFQRLSR RYGVHSKRSK DSVEAVTDPA TGVYPEGNFN EMLAFERKRA ERSKRPFMLM 
LLDISVLPSG YNGDNPRKKV ICSLSFSTRE TDIVGWYKGD DVLGVLFTEL GESDSAVAAG
KILDRVCENL TTNLDGKRVK DIDITIHLFP EEFDKPNLRY SSDLKLYPDL ETKNTSKRIA
LAVKRGIDIA GSLFALVLFS PLFLTLSALI KWTSKGPVFF RQSRVGQFGK PFMMYKFRSM
FVDNDPGIHR EYIKQLIGSG DRPAKECARG EEQVFKIQHD PRVTSIGRFL RKTSLDELPQ
FINVLKGEMS LVGPRPPIPY ELECYDTWHR RRLMEMTPGI TGLWQVTARS RTTFNEMVRL
DIRYARRWSL WLDIKLLVLT PWVVLRSRGA Y