Gene Sfum_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0912 
Symbol 
ID4460309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1125941 
End bp1126639 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID639701675 
Producthypothetical protein 
Protein accessionYP_845043 
Protein GI116748356 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.409421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGAC AATACTATCC ACAGCAAGAT CAGGTTGTGG CCATTCAAAG TGATTTTGTC 
CGCCGTGTGT ACAACTGGAT GGGGATCGGG CTTGCCACGA CGGCAGTGGT CGCCATGCTC
ACATTTTCCA GCTCAACGAC CAGTCGACTG CTCGCTCAAT ATCCCGGCCT GATGCTGGGT
CTCGTCCTCG CGGAGCTCGG TCTCGTGATC GCCATCAGCG CCGGTATAAA CCGGTTTCGC
GCCTCGAGCG CAACGCTCAT GTTTTTCATT TACTCCGCGC TGAATGGAGT GACCCTCTCG
GTCATTTTTC TTGTCTACGC ACATTCGTCC ATTGCCAACA CGTTTTTCGT GACGGCCGGA
ATGTTTGCGA TCATGAGCGT CTACGGCTAC ACGACCCGCA CGGACCTGAC ATCCTTGGGC
AACTTCCTTT TCATGGGCCT GATCGGAATC ATTCTGGCAT CCGTGGTGAA CATTTTCCTC
GGCAGTCAAT CCCTTGACTG GATTATTTCC TGCCTGGGCG TGATCATCTT CGTCGGCCTC
ACCGCCTACG ATACTCAGTC CATCAAGGCA ATGGCCCACG GCGGGTTCGC CGATGCGGAA
ACCGAACAGA AGGCGGCGGT GATTGGAGCA TTGCGGCTGT ATCTTGACTT CATCAACCTC
TTCCTCATGC TGCTCAGGCT CTTCGGGCGC CGCGACTGA
 
Protein sequence
MERQYYPQQD QVVAIQSDFV RRVYNWMGIG LATTAVVAML TFSSSTTSRL LAQYPGLMLG 
LVLAELGLVI AISAGINRFR ASSATLMFFI YSALNGVTLS VIFLVYAHSS IANTFFVTAG
MFAIMSVYGY TTRTDLTSLG NFLFMGLIGI ILASVVNIFL GSQSLDWIIS CLGVIIFVGL
TAYDTQSIKA MAHGGFADAE TEQKAAVIGA LRLYLDFINL FLMLLRLFGR RD