Gene Sfum_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0909 
Symbol 
ID4460306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1121387 
End bp1123432 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content59% 
IMG OID639701672 
Productmagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase 
Protein accessionYP_845040 
Protein GI116748353 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CCCTGGTCTT TCCGCCTTTC TACCTCGAGC CCATGTATAA CATGCCTCCC 
CTGGGCCTGA TCCACCTGGC GACAAACCTC GCCGCCGACG GTCATGACCC GTTCATTCTC
GACTTTCCCC TGGACATTCG TCGAGGAAGG CTCCACTTGG GAAAGCGGAT CTACGCCGAC
TGCGCTTCCA GGATACTGGA AGAAGACCCG GGCATGGTCG GCTTTTCGGT GCAATGCACC
ACTTTCCCGG GCGCGGTCCG TATCGCGCAA CTGGTGAAAG CTCAAAACCC CGGCATCAAG
ATCGTGTTCG GAGGACACAG CGCATCCGCG GTGGATATCG AAACCCTCGA GGCATTCCCC
TGGATCGACG CGGTCGTGCG CGGCGAGGGG GAGATCACGA TGTCCGAGCT CGCTTCGCGC
TGCGTCCGGG CGGAGGGGCT CCACGGCGTC CGGGGGCTTT CCTTTCGTGA CGGCGGCACA
GTCTTTCGAA ACGGGGATCG CGAGCTGATC GCCGACCTGG ATGAACTGCC CCTGGCCGAC
TACTCGTTCG TACCTCCCTT TTCCACCTAC CGGGATTCCT GCGGCATTCC GCGAAGCATC
GCCATCCTCG AAGTCGGCCG CGGCTGCCCC CACCATTGCA TCTATTGTTC CCAGTCGGTC
ATGTGGAGAC GTCGGCAGAG AACGTATTCG GTTCCCCGGC TGATCCGGGA AATGCGTAAC
CTGCGGGACC GGTACGGGGC CCAGTGTTTT CTGCTCGCCT ACGATCAGTT CACGGCGCGG
AGAAGCTTCG TGGAACAGTT CTGCGGCACG CTCATCGAAA CCGGTCTGAA CCGTGTTCCC
TGGTATTGCA TCTCGAGGCT CGACACCGTG GACGCGGAGC TTCTCGGGCT CATGCGGGAG
GCCGGATGCG AATCCATGTG CTACGGCATC GATTCCGGCT CGAAAAGAAC CCTTGCCTTC
ATTCGGAAAA ACATCGACGG CGACATTCTT CTCCGTCGCG TGAGGGAGAC CACGGACCAG
GGCATCGTTC CGACGCTCAG CTTTGTGATC GGTTTTCCGG AGGAGGAACG GGAAGACATC
GACGCCACCC TGGAACTGAC GCTGCGAACC GGTGTGCAGG GAGGCATCAA CCCGTTGCTG
CAACTGGCGA CCGTCCTCCC CGGAACCGAT CTCTTTCAGG GGTATGCCGA CCGCCTGGTC
CGCTCGGTGG ACACCTATTT CTCGCTGGGC ATCGAATTCG ACGGGGCAAG ACGCCTCCGA
TCGGACGATG AACTCATCGA TGCCCACCCC GCGATTTTTT GCAGCTTCTA CAACCTTCCC
TGCCCCGCCT TCCCGCTTGA AACGCTGAAC GTTCTCGCCG TCGGGTTTCC CCTGATCGTC
AACTTCTATC CACGCTCGTT TCTGCTCCTG ATGCTGGAGG CCGGCGAGTC GCCCTCCGGC
TTGTTTTTCC GTTTCATGGA TTGGCTGGCT CAAACCGGCC GAAAGACGGA CTCGACGCTT
TCCCCCCGGG ACTGTTACAA TCATTTTGCC GCGTTCACCG TGGAGACCGT AGCCTCCCTG
GACCATCTCG AGAGGCATTA CCTGCCCGAG ATGATCCGGT ACGAGACGAT GGCGCTTGAG
GCCGGAAAGT TCGATTCGGC GGATACCGCC TTCTTCATGG ATCTTTCCGG TATAGGAAAT
CTCAAACCGC TTCTCGCGAG AAACATCGTC CTCGGGGAGT TCACTTTCAA TCTGCCGGAC
ATTATTTTGG ACATCAAACA CGGGGTTTTG GACAAGACCT ATTCGCCATC GCGGACCTTC
ATGGTCTTTT CGCACCGGGC GAACGAACTC GACGTAAAGG AAATCAACGA TTTCGGAATG
GACCTGCTGC GGCGCTGCGA CGGCACAACG ACCGTCGCGG ACATTAGTCG GGATCTTTTT
GCGGCTTATG GGAAGGAATC TACTCACGAG GCGTTTTTCG ACCTCTGTGT GGATGCGATT
CGGGAACTGG CCGAGCTGAA TCTGGTGCAG CCCGGATCGC CTCATCACTT GCCGGAAAGG
GGGTGA
 
Protein sequence
MRIALVFPPF YLEPMYNMPP LGLIHLATNL AADGHDPFIL DFPLDIRRGR LHLGKRIYAD 
CASRILEEDP GMVGFSVQCT TFPGAVRIAQ LVKAQNPGIK IVFGGHSASA VDIETLEAFP
WIDAVVRGEG EITMSELASR CVRAEGLHGV RGLSFRDGGT VFRNGDRELI ADLDELPLAD
YSFVPPFSTY RDSCGIPRSI AILEVGRGCP HHCIYCSQSV MWRRRQRTYS VPRLIREMRN
LRDRYGAQCF LLAYDQFTAR RSFVEQFCGT LIETGLNRVP WYCISRLDTV DAELLGLMRE
AGCESMCYGI DSGSKRTLAF IRKNIDGDIL LRRVRETTDQ GIVPTLSFVI GFPEEEREDI
DATLELTLRT GVQGGINPLL QLATVLPGTD LFQGYADRLV RSVDTYFSLG IEFDGARRLR
SDDELIDAHP AIFCSFYNLP CPAFPLETLN VLAVGFPLIV NFYPRSFLLL MLEAGESPSG
LFFRFMDWLA QTGRKTDSTL SPRDCYNHFA AFTVETVASL DHLERHYLPE MIRYETMALE
AGKFDSADTA FFMDLSGIGN LKPLLARNIV LGEFTFNLPD IILDIKHGVL DKTYSPSRTF
MVFSHRANEL DVKEINDFGM DLLRRCDGTT TVADISRDLF AAYGKESTHE AFFDLCVDAI
RELAELNLVQ PGSPHHLPER G