Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0876 |
Symbol | rnc |
ID | 4460500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1082176 |
End bp | 1082904 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701639 |
Product | ribonuclease III |
Protein accession | YP_845008 |
Protein GI | 116748321 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGT CCGACGGGCT TGAGGCGCTT CAGAACCTTC TCGGCTACCG TTTCGGCGAT GAAGGACTCC TTCACCGGGC CCTGGTGCAC CGGTCCTACC TGCACGAGAA TCCACACCTG GACGAGAAGG ATAACGAAAC CCTCGAGTTT TTGGGGGATG CGGTGCTGGG GCTTGCGATC AGCCACTTCC TGTTGGAACA GTTTCCGGAC TACAACGAAG GGGAGCTCTC CCGTCTCCGG TCCGCCATCG TCAACGAACG GGAGTTGACC CGGATCGCCG TCGAGCTCAA TCTCGGAGAA TACCTGTTGC TGGGAAAGGG CGAGGAGATG ACCGGCGGAC GCCGGAAAGC CTCCTTGCTG GCCGACAGCC TGGAAGCTCT GCTCGCGTCC ATCTACCTCG ATGGCGGCCT GGACGCGGTT CTCGGCGTGA TCAAGAAGCT CTTCGACGTG TATCTTCGGT TCGAAAAGCG GGAACATGTT CTCAAGGCGC TGGACAAGGA CTACAAAACC CAACTGCAGG AACTGACCCA GGCCCGGTAC AAGCTCACTC CGGTGTATGT TCTGGACCGT GAGGAGGGGC CGGACCACGA CAAGACCTTT CACATGAACG TGGTCCTCGA AGGGCAGGTG TTGGCCGGCG GATCGGGCAA AAGCAAGAAA GACGCCCAGC AGGCCGCCGC CGAGAAGGCA CTGCAAATCA TTGCCGCGGA TTCATGGTCC CTTGACTGA
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Protein sequence | MKPSDGLEAL QNLLGYRFGD EGLLHRALVH RSYLHENPHL DEKDNETLEF LGDAVLGLAI SHFLLEQFPD YNEGELSRLR SAIVNERELT RIAVELNLGE YLLLGKGEEM TGGRRKASLL ADSLEALLAS IYLDGGLDAV LGVIKKLFDV YLRFEKREHV LKALDKDYKT QLQELTQARY KLTPVYVLDR EEGPDHDKTF HMNVVLEGQV LAGGSGKSKK DAQQAAAEKA LQIIAADSWS LD
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