Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0836 |
Symbol | |
ID | 4460783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1039242 |
End bp | 1040198 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701598 |
Product | inner-membrane translocator |
Protein accession | YP_844968 |
Protein GI | 116748281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.997362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGC AACTCAAGTC GATCGGCATA CCGGCGGTCC TGTTTGCATG TCTGCCGCTG TTTTTGAACG CCTACTGGAT TGATGTGCTC AACAGCGTGG GCATCTACGC CATCCTCGGG CTGAGCCTGA ACCTCATTGT CGGCCACACC GGGCTTTTCA ACCTCGGTCA CGCGGCATTC TACGCGGTGG GAGCCTATAC GGCCGCCATC CTCAACACCA AGTTCCAGGT TCCGGTGCTG TTGCTTATTC CCGTGTGCGG TTTCGCGGCG GGGCTCTTCG CCCTGGTCGT TTCCAAACCG ATCATTCATC TGCGCGGGGA CTATCTGTGC ATCGTGACCA TCGGTGTGGG GGAAATCGTG CGCATCGCGC TTATCAATGA CGTCTTCGGC ATCACCGGGG GCTCGAACGG CATTTTCGGG ATATCCAGGC CGTCCCTGTT CGGGTTCGTA ATCCGCACGC CCCTGGAGTT TTTCTACCTC ATCTGGGCGT TTGCCGCGAT CACCGTGCTG CTCTTTCACC TCCTGGAACG CTCCCGCTTC GGGCGCGCGT TGAACTACTT GCGCGAAGAC GAGGTCGCCG CCGAGGGCAG CGGCATCAAC ACCGCTCACT ACAAGCTGGC CTCGTTCGTG ATCGGGGCCG CCTGGGCCGG TATGACGGGC AATCTCTTCG CCGCAAAAAT GACTATTATC TCGCCGGATT CCTTTACATT CTGGGAATCC GTCGTGATGT TCGCCATCGT CATCCTGGGC GGCTCCGGAA GCATCCCGGG AGTGTTGGTC GGAGCCTTTC TGATCGTCGG GCTGCCGGAG GTCTTCAGGG AGTTCGCGAA CGCGCGGATG CTGGTTTTCG GGGCGGCAAT GATGGTGATG ATGGTGTTTC GGACCCAGGG GCTTCTGCCG GCACGACCGC GCCCATACGC CATTCCCGCG TTGCCCGAAG GGGAGGGCGG GGAATGA
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Protein sequence | MIRQLKSIGI PAVLFACLPL FLNAYWIDVL NSVGIYAILG LSLNLIVGHT GLFNLGHAAF YAVGAYTAAI LNTKFQVPVL LLIPVCGFAA GLFALVVSKP IIHLRGDYLC IVTIGVGEIV RIALINDVFG ITGGSNGIFG ISRPSLFGFV IRTPLEFFYL IWAFAAITVL LFHLLERSRF GRALNYLRED EVAAEGSGIN TAHYKLASFV IGAAWAGMTG NLFAAKMTII SPDSFTFWES VVMFAIVILG GSGSIPGVLV GAFLIVGLPE VFREFANARM LVFGAAMMVM MVFRTQGLLP ARPRPYAIPA LPEGEGGE
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