Gene Sfum_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0829 
Symbol 
ID4460776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1028166 
End bp1029164 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content63% 
IMG OID639701591 
Productalcohol dehydrogenase 
Protein accessionYP_844961 
Protein GI116748274 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID[TIGR02822] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.948328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAA TGGTTCTGAA GGCGTGTGCC CCGATGGAAA CGAAGCCCCT CGAATGGCTG 
GAGGTGGATG ATCCACTGCC CGGCCCCGGG GAAGTGCGCA TCAGGGTGAA AGCGTGCGGC
ATATGCAGGA CCGACCTGCA CGTGGTGGAG GGGGAATTGC CTTCCCTCGG GCGTCCCGTC
ATTCCGGGCC ACCAGATCGT CGGCCTGGTG GATTCCATCG GAACCGGCTG TCGGCGGTTC
AAGATCGATG ACAGAATCGG GGCGGCATGG TTGAGACAGA CCTGTGGAAC ATGCGTCTTC
TGCCGCTCCG GGCAGGAGAA TCTGTGTGAA AACGCCAGAT TCACCGGCTA TCATGCCCCT
GGCGGGTACG CCGAATATGC CGTGGTCCCG GAAGATTTCG CCTATCCCAT TGCGCCCGTC
TTCAGCGACG CGGAAGCCGC ACCGCTGCTG TGCGCCGGCA TTATCGGTTA CCGGAGCCTG
AGGCGCAGCC AGTGCAAAGC CGGCGACACC CTGGCCCTGT ACGGATTCGG TTCGTCGGCG
CACATCGTCA TTCAGATCGC CGTCCACTGG GGTTGCACGG TGTATGCCGT CACCCGCGGC
GAGAGACATC GGCGGCTGGC ACTGGAGCTC GGGGCCAAAT GGGCCGGATC CGACGCGGAA
CGGCTGCCCG CCCCGGCGGA CAGCGCCATC ATCTTCGCCC CCGCGGGAAA CCTCGTGCCC
GTGGCGCTGA GCCGTTTGCG CAAGGGCGGT ACGCTGGCCC TTGCCGGGAT CTATATGACC
GACATTCCCG GGATGAATTA CGAGAAGCAC CTTTTCTACG AAAAAAACGT TCACAGCGTC
ACGGCCAATA CGCGGGAAGA CGGCATGGAG CTGCTCAGGA TCGCCGCGTC CATACCCATT
CGCCCGCAGG TGCAAACGTT TGCCGTGCAG GAAGCCAACG AAGCGCTGCT CAAGCTCAAG
AATGACCGGA TTGAGGGCTC GGGGGTGCTG GTATTCTGA
 
Protein sequence
MRAMVLKACA PMETKPLEWL EVDDPLPGPG EVRIRVKACG ICRTDLHVVE GELPSLGRPV 
IPGHQIVGLV DSIGTGCRRF KIDDRIGAAW LRQTCGTCVF CRSGQENLCE NARFTGYHAP
GGYAEYAVVP EDFAYPIAPV FSDAEAAPLL CAGIIGYRSL RRSQCKAGDT LALYGFGSSA
HIVIQIAVHW GCTVYAVTRG ERHRRLALEL GAKWAGSDAE RLPAPADSAI IFAPAGNLVP
VALSRLRKGG TLALAGIYMT DIPGMNYEKH LFYEKNVHSV TANTREDGME LLRIAASIPI
RPQVQTFAVQ EANEALLKLK NDRIEGSGVL VF